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biological diversity exam 2
Organismal Survey
45
Biology
Undergraduate 2
03/05/2013

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Term
What Domain is Prokaryotes in?
Definition
Domains Bacteria and Archaea
Term
Features of Prokaryotes
Definition
  1. First life forms to evolve
  2. Unicellular but may form collonies
  3. microscopic cells
  4. Three body forms
  5. Short generation time
  6. High rate of mutation
  7. higher species diversity than eukaryotes
  8. Greater biomass of any organsim
  9. can live in extreme environments

 

Term
What was the first prokaryote to form?
Definition
Shark bay stromatolites- first to form, western australia, no outside organism can cross the land mass
Term
what size are prokaryotes
Definition

0.-5 microns vs. 10-100 microns of a eukaryote

 

Term
what are the three body forms of a prokaryote
Definition

Spherical (cocci)

rod (bacilli)

Spiral

 

Term

why do prokaryotes have a short generation time?

 

Definition
Reproduced by asexual binary fission-takes as little as 20 minutes
Term
Why do prokaryotes have a high rate of mutation?
Definition
  • gene pool diversification and adaptation
  • lack homologous chromosomes= all mutations passed onto next generation

e.g., there is a greater ribosomal RNA gene variation between 2 strains of E. coli than between a human and a platypus!

 

Path note: E. Coli species is so diverse= hard to keep ahead (medicine) pathogenically

 

 

Term
Why do prokaryotes have a higher species diversity than Eukaryotes?
Definition
Bacteria is not diploid= 100% of mutations will be passed on to the next generation
Term

Cellular Structure of prokaryotes

 

Cell wall Fx

Definition
  1. provides structure
  2. prevents lysis in hypotonic state and crenation in hypertonic state
  3. reduces desiccation
  4. reduces abrasion (sand wind salt environment
  5. reduceschemical diffusion E.g., antibiotics in gram neg spp.
Term

Cellular Structure of prokaryotes

 

Domain Bacteria cell wall

Definition
Composed of peptidoglycan (vs. cellulose of chitin in eukaryotes)
Term

Cellular Structure of prokaryotes

 

Gram negative spp. cell wall

Definition

Complex cell wall

Likes anerobic environment

  1. helps protect bacteria from immune response in humans
  2. resists many antibiotics
  3. w/ lipopolysaccaride membrane that may be toxic causing fever/ shock (e.g., Tampons toxic shock syndrome (TSS)

Note:Pennicillin inhibits formation of peptidoglycan making the cell wall non- functional (doesn't kill, just prevents  reproduction)

Term

***** Cellular Structure of prokaryotes

 

Domain Archaea Cell wall

 

Definition

Composed of polysaccharides and protein but with out polypeptidoglycan

this is different than that of bacteria

 

Note: it is this difference in cell wall chemistry tht is one of the promary characteristics that seperates the two domains

Term

Cellular Structure of prokaryotes

 

Capsules

Definition

Many prokaryotes have cell walls covered with capsules made of sticky protein or polysaccharide

 

e.g., not brushing teeth, wash your toothbrush

Term

Cellular Structure of prokaryotes

 

Fx of capsuels

Definition
  1. stick to surface
  2. form colonies
  3. resist attack by immune responses
  4. reduce deseccation
Term

Cellular Structure of prokaryotes

 

Finbriae

Definition
Hair-like appendages found in some prokaryotes
Term

Cellular Structure of prokaryotes

 

fx of fimbriae

Definition

Attachment

 

e.g., Neisseria gonorrheae attaches to mucouse membrane in the ureathra with fimbriae

Term

Cellular Structure of prokaryotes

 

Sex pili(us)

Definition

Long hair-like  retractable extensions from cell wall

most in gram negative bacteria

not archaea

Term

Cellular Structure of prokaryotes

 

fx pili(us)

Definition

pulls together prior to plasmid transfer.  Turns into the conjugation bridge.

 

[image]

 

 

Term

Cellular structure of Prokaryotes

 

Flagella

Definition

Motile appendages used for propulsion..occur in any number and any location on cell

 

Fx: allow taxis (movement in response to stimulous)...movement may be positive or negative.  E.g., positive phototaxis= moving toward light

Term

Cellular structure of Prokaryotes

 

Lack organelles

Definition

no organelles, however, some prokaryotes have membrane folds that perfome specialized functions

 

ex.

1. Respiratory folds takes place of mitochondria =energy

2.Thylakoid membranes replace ribosomes for protein synthesis

Term

Cellular structure of Prokaryotes

 

Lack nucleus

Definition

Genome is located in a region called a nucleoid...no membrane

(oid means look like)

 

this is natures first attempt to produce functional cells.

Term

Cellular structure of Prokaryotes

 

Genetic material

Definition

Prokaryotes lack true chromosomes

 

has Histone proteins that gift wrap ?(not in backteria /archaea)

 

Contains single circular DNA "chromosomes" with limited proteins as in eukaryotes

 

Usually contains plasmids, smaller rings of self-replication DNA. Carry accessory genes not found in "chromosomes" e.g, genes for sex pili, or genes for antibiotic resistance (known as the R plasmids)

Term

Cellular structure of Prokaryotes

 

Endospores

Definition
some bacteria replicate the "chromosomes" and encapsulate it to survive adverse environments (when essential nutrienst are lacking)
Term
How are endospores made?
Definition
  1. The cell replicates its "chromosomes"
  2. encapsilates it ina an endospore
  3. the remainder of the cell degenerates and water is excluded from the endospore and metabolisme stops

 

endospores can last centuries in favorable environments.  can survie boiling water.  killed in autoclave at 121°C

Term

Reproduction of Prokaryotes

 

Definition

Prokaryotes recombine their genome by a variety of asexual methods

 

some species can fission in as little as 20 min (E.coli) under ideal conditions although most take 1-24 hrs.

Term
What accounts for the diversity found in prokaryotes?
Definition

Rapid reproduction

and mutations (base insertion, deletion, and substitution account for most all variation.)

Term

Genetic Recombination and Reproduction

 

Binary fission

Definition

Non-mitotic replication of the "chromosomes" and subsequent division into two daughter cells

 

[image]

 

Term
Difference in Binary Fission and horizontal gene transfer
Definition
Binary fission increases in the number of cells while horizontal gene transfer results ina  change in the genome of existing cells
Term

Genetic Recombination and Reproduction

 

Transformation

Definition

The uptake of foreign DNA from environments, results in a change in genotype (DNA) and possible phenotype (appearence).

 

Note:

A non-pathogenic strain can pick of the pathogenic gene from ruptured cells in its environment!  This is accomplished through special cell wall proteins that recognize DNA from related species & transport it into the cell.

Term

Genetic Recombination and Reproduction

 

Transduction

Definition

Bacteriophages carry bacterial genes from one host to another during phage reproduction

 

Virus not capable of reproduction on own

Term

Genetic Recombination and Reproduction

 

Conjugation

Definition
A one way transfer of genetic material between two bacerial cells (same or different species) via transfer of either a plasmid or a piece of a chromosome conaining a piece of Dna known as F factor (F=fertility) (required to form sex pili aka conjugation pilus/bridge)
Term

Genetic Recombination and Reproduction

 

Conjugation

 

note from example

Definition

F plasmid and F chromosome pieces also contatin many genes not associated with formation of the pilus...modifies the genome of the recipient.  Like a happy meal with an extra toy.

 

these plasmids may contain up to several hundred genes.

Term
F factor DNA Transfer
Definition
Requires piece of DNA know as F factor to form sex pilus.  Cells with F factor are F+.  Only F+ cells can donate DNA.  F- receive DNA then become F+ 
Term
F factor plasmid transfer
Definition
f factor contained in plasmid
Term
f factor chromosome transfer
Definition

transfers via  HFr cell ( high frequency recombination) F factor integrates into the bacterial chromosome.

 

know figure 27.13

 

R plasmids may also be transferred by plasmid transfer and confer resistance to antibiotics.

Term
Energy source for life forms
Definition
how the source recieves it Carbon and energy
Term
Autotrophic(trophs)
Definition

Require inorganic source of carbon eg. CO2-carbon dioxide

 

plants, algea

Term
Heterotrphic(trophs)
Definition

Require organic source of carbon eg. glucose

 

humans, animals

Term
phototrophic(trophs)
Definition

energy obtained from light

 

plants, blue green bacteria

Term

Chemotrohic(trophs)

 

Definition
Energy from chemicals (inorgani/organic chemicals)
Term
major nurritional modes
Definition

Photoautotroph-light energy-CO2 carbon

chemoautotroph- inorganic chemicals energy- CO2 carbon

 

Photoheterotroph- light energy- organinc componds carbon

 

Chemoheterotroph- organic compounds for energy- organic compounds for carbon...glucose+ chemicals=humans

 

know table 27.1

Term
Aerobic respiration
Definition
oxygen used in ATP synthesis (Net 36 ATP)
Term
Anaerobic respiration
Definition

oxygen not used in ATP synthesis (only glycolysis net 2 ATP)

bogs swamps etc... these types of organisms are typically poisoned by oxygen

Term
obligate aerobes
Definition
must have oxygen for ATP synthesis- humans
Term
obligate anaerobes
Definition

Oxygen is toxic

eg. Clostridium botulinum-dented can goods

botulism, botox...

 

     Use either fermentation or use nitrate (NO3-)or sulfate (SO42-)to accept  
     electrons instead of O2 in the electron transport chain.

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