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BIOL 200 Exam 2
Cells-Metabolism
49
Biology
Undergraduate 1
02/15/2012

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Term
Describe the following characteristics for Ribosomes:
1. Structure
2. Function
3. Location
Definition
1. solid subunits; made of 1-3 rRNA's and 20-30 proteins
2. protein synthesis
3. free in cytoplasm, attached to ER, inside mitochondria or chloroplasts
Term
Describe the cytoplasm
Definition
-aqueous mixture with proteins
-many proteins are enzymes
Term
Describe the following characteristics for the Nucleus:
1. Structure
2. Function
3. Location
4. Nucleolus?
Definition
1. Double membrane
-contains thousands of pores that regulate transportation
-Proteins targeted for the Nucleus have a short peptide Nuclear Localization Signal
2. stores DNA
3. center of cell
4. Nucleolus stores genes that code for rRNA
Term
Describe the following characteristics for Endoplasmic Reticulum:
1. Structure
2. What two types?
3. Function
Definition
1. single membrane surrounding central lumen
-composed of tubes and flattened sacs
-can take up to 10% of cell's volume
2. Rough and Smooth
3.The proteins in the ER can be chemically modified to alter their functions.
- “tagged” with a short peptide signal to mark them for delivery to various organelles by vesicles.
-Some of these proteins have an oligo-
saccharide chain attached and form Glycoproteins.
Term
Describe the following characteristics for the Rough ER:
1. Structure
2. Function
Definition
1. studded with ribosomes
2. synthesize Glycoproteins, membrane-bound proteins, and proteins destined for various organelles
Term
Describe the following characteristics for the Smooth ER:
1. Structure
2. Function
Definition
1. lacks ribosomes and is more tubular than flattened sacs
2. chemically modify some of the proteins made in rough ER
-detoxification
-synthesis of phospholipids and other lipids (steroids)
Term
Describe the Endomembrane system
Definition
-group of functionally interrelated organelles
-includes includes the Nuclear Envelope, Endoplasmic Reticulum, Golgi Apparatus, Lysosomes, Plasma Membrane, and other vesicles
-Cells which secrete large amounts of proteins have more extensive ER than other cells
-Vesicles transport proteins synthesized by the ER to the Golgi Apparatus
Term
Describe the following for the Golgi Apparatus:
1. Structure
2. Functions
Definition
1. flattened sacs surrounding lumen
2. store and modify carb portion of glycoproteins
-concentrates, packages and sorts proteins
-synthesize polysaccharides for cell wall
Term
Describe the following for the Lysosome:
1. Structure
2. Functions
3. Primary and Secondary
Definition
1. large vesicle containing digestive enzymes (glycoproteins)
-single membrane
2. digestion via hydrolytic reactions
3. primary comes from golgi
-secondary fuses phagosome
Term
Describe the following for the Mitochondria:
1. Structure
2. Function
Definition
1. Double membrane
2. convert energy in organic molecules into ATP
Term
Describe the following for the Chloroplast:
1. Structure
2. Function
Definition
1. 3 membranes
2. photosynthesis
Term
What are the 3 types of Plastids and what are their functions?
Definition
1. Chloroplasts- photosynthesis
2. Chromoplasts-store pigments
3. Leukoplasts- store food
Term
What is the Endosymbiant Theory?
Definition
large prokaryotic cells engulfed small ones leading to double membranes and mitochondria and chloroplasts
Term
Describe the following for the Microbodies:
1. Structure
2. Function
3. Examples
Definition
1. vesicle-like
2. contain enzymes for specific functions
3. perioxisomes-contain catalyase to degrade hydrogen peroxide
glyoxysomes- contain digestive enzymes; convert lipids into carbs
Term
Describe the following for the Vacuoles:
1. Structure
2. Function
Definition
1. similar to vesicles
2. -storage of food or waste
-maintain turgor pressure
-store anthocyan (pigment)
Term
Describe the following for the Microfilaments:
1. Structure
2. Function
Definition
1. thin rods of actin
2. cellular movement (muscle contraction), cytoplasmic division
Term
Describe the following for the Intermediate Filaments:
1. Structure
2. Function
Definition
1. thin rods of keratin
2. maintain cellular shape
Term
Describe the following for the Microtubules:
1. Structure
2. Function
Definition
1. Larger, long hollow tubes of Tubulin contributing to the cytoskeleton
2. form cellular roads
-form cilia and flagella
Term
Describe the following for the Cell Wall:
1. Structure
2. Function
Definition
1. thin mat of cellulose fibers
2. support cell
-limits volume to help maintain turgor pressure
-protects from fungi and bacteria
Term
Describe the following for the ECM:
1. Structure
2. Function
Definition
1. interwoven mat of fibrous proteins
2. help connect adjacent cells to each other
Term
What makes the membrane selectively permeable?
Definition
-Polar molecules cannot pass through hydrophobic center
-Nonpolar can generally diffuse through membrane
Term
Why is the cell membrane called a Fluid Mosaic Model?
Definition
Fluid: Phospholipids in membrane are not covalently bonded so they are free to move

Mosaic: Proteins and Carbohydrates (glycoproteins/lipids) are embedded into the membrane
Term
What are the 3 factors that affect fluidity?
Definition
1. Shorter hydrocarbon chains
2. More unsaturated hydrocarbons
3. More cholesterol
Term
What are the two types of membrane proteins?
Definition
1. Peripheral- less closely associated to membrane; loosely bound; used for polar bonding
2. Integral- more closely associated; transverse; used for non polar bonding
Term
What are the functions of membrane proteins?
Definition
1. Transport
2. Enzymes
3. Receptors
4. Cell Adhesion
5. Anchor organelles
6. Antigens (glycoproteins)
7.
Term
What is the structure and function of the 3 types of animal cell junctions?
Definition
1. Tight Junctions
Structure: proteins stitch membranes together
Function: limit movement of materials through space between cells
-limit movement of proteins and lipids in membrane
-connect adjacent cells
2. Desmosomes
Structure: Keratin fibers connect adjacent Cytoplasmic Plaques
Function: connect cells that are subject to greater mechanical stress
3. Gap Junctions
Structure: transport proteins form channels connecting cytoplasm of adjacent cells
Function: communication
Term
How does the cell connect to the extracellular matrix?
Definition
-transmembrane Integrin proteins
-connect Actin microfilaments to protein in ECM
-bond is non covalent and reversible
Term
The rate of diffusion depends are what 4 factors?
Definition
1. electrical charge
2. temperature
3. concentration
4. molecular size
Term
What is facilitated diffusion?
Definition
the diffusion of macromolecules and polar molecules across a membrane using proteins
Term
What is primary active transport?
Definition
the transport of a substance against its concentration gradient with the expenditure of energy
Term
What is secondary active transport?
Definition
the uses of active transport to drive facilitated diffusion
Term
What are the 3 types of transporters?
Definition
1. Uniports- one solute
2. Synports- two solutes in same direction
3. Antiports- two solutes in different directions
Term
What is osmosis?
Definition
-diffusion of water
-water moves through aquaporins
-can bind to cations like Na
Term
What is the definition of metabolism?
Definition
total chemical activity of a living organism
Term
What are the 3 types of energy?
Definition
1. Kinetic Energy: The type possessed by moving objects
2. Potential Energy: The type possessed because of location or arrangement
3. Chemical Energy: Form of Potential Energy stored in Molecules because of the arrangement of atoms
Term
What are the two types of metabolic reactions?
Definition
1. Catabolic- break down and release energy
2. Anabolic- build up and input energy
Term
What are the 1st and 2nd law of thermodynamics?
Definition
1. energy may neither be created or destroyed
2. in any energy conversion, some energy is lost from doing work, so Entropy increases
Term
What is a typical energy equation and what the letters stand for?
Definition
H=G+TS
H- enthalpy; total energy of molecule
G- free energy; usable energy available for work
T- temperature
S- entropy; unusable energy
Term
What is chemical equilibrium?
Definition
Point in a Reversable Chemical Reaction at which there is no net change in the concentration of Reactants or Products


Ke = [Products]/[Reactants]
Term
What is Gibb's Free Energy (Delta G)?
Definition
H of Products - H of Reactants
Term
Explain the relationship of Delta G and Exergonic and Endergonic reactions.
Definition
Exergonic: -G; larger the -G the more energy released; larger Ke
Endergonic: +G, larger the +G the more energy required; smaller Ke
Term
What is a major function of ATP?
Definition
-Couple Exergonic to Endergonic Reactions.
-ADP picks up energy from an Exergonic reaction (Cellular Respiration) and uses the energy to attach a PO4 making ATP.
-ATP can be split to give off energy to drive another reaction
Term
How are substrates held to the active site?
Definition
hydrogen bonds, electrical attractions, temporary covalent bonds
Term
How can enzymes induce change?
Definition
-cause bonds to stretch and break
-transfer H+ from acidic side group
-form temporary covalent bond with side group
-donate or receive electron from metal ion
Term
What non protein partners assist enzymes?
Definition
-prosthetic groups are non peptide functional groups bound to enzyme
-cofactors are inorganic ions
-coenzymes are small molecules derived from vitamins
Term
What is Competitive Inhibition?
Definition
-occurs when inhibitor is shaped much like substrate
-binds to active site and blocks it
Term
What is Noncompetitive Inhibition?
Definition
-occurs when an inhibitor binds to separate site and changes the shape of the enzyme
*Allosteric- two different shapes
Term
What is Feedback Inhibition?
Definition
-occurs when a product from end of a metabolic pathway acts as a noncompetitive inhibitor
-inactivates enzymes earlier in pathway
Term
What are 4 denaturing agents?
Definition
1. Heat
2. Strong Acid
3. Strong Base
4. Highly charged ions
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