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Biochemistry
Glycolysis
25
Biology
Graduate
11/04/2011

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Term
Define Glycolysis
Definition
generates atp for us in various energy requiring processes in cells and provides various glycolytic intermediates that are used as precursors for biosynthesis of other biomolecules
Term
Where are the 3 control points and what is so special about them?
Definition
Phosphofructokinase, Hexokinase, and Pyruvate kinase. Under the right physiological conditions, these reactions will be effectively irreversible. Also each reaction can be modulated by the binding of allosteric effectors.
Term
Phosphofructokinase does what?
Definition
Fructose 6-phosphate + ATP --> Fructose 1,6-biphosphate + ADP
Term
Hexokinase does what?
Definition
Glucose + ATP --> glucose 6-phosphate + ADP
Term
Pyruvate kinase does what?
Definition
Phosphoenol pyruvate + ADP --> pyruvate + ATP
Term
What serves as a signal for a low energy state in the cell?
Definition
AMP
Term
What reflects the energy charge of the cell?
Definition
the ratio of [ATP]/[AMP]
Term
What is the most important control point in mammalian glycolysis?
Definition
Phosphofructokinase
Term
Describe the phosphofructokinase enzyme
Definition
A tetrameric enzyme which has 4 catalytic sites and 4 regulatory sites. T and R states have respectively, lower and higher affinities for F6P. Binds F6P with positive cooperativity
Term
ATP is what kind of regulator and for what? Where does it bind? What does it stabilize? which lowers the affinity of the enzyme for what?
Definition
negative regulator for PFK, regulatory site/allosteric site, and stabilizes the T-state, lowers affinity for F6P
Term
What is the positive regulator of PFK? What does it compete with and for what? What does it do that the negative regulator doesn? basically what is its function
Definition
a positive regulator for PFK, competes with ATP for binding to the allosteric regulatory site, doesn't induce conformational change( which reduces affinity for F6P) - stabilizes the R state; reverses the inhibitory effect of ATP
Term
Describe the hexokinase enzyme
Definition
a monomeric enzyme
Term
What is the negative regulator of HK?
Definition
G6P
Term
The activity of _____ is coupled to the activity of ______
Definition
phosphofructokinase
Term
High concentrations of ___ inhibit PFK activity
Definition
ATP
Term
If there is an overaccumulation of fructose 6 phosphate, it is in reverse equilibrium with _____ via which reaction?
Definition
glucose 6 phosphate; via the phosphoglucose isomerase reaction
Term
When the concentration of fructose 6-phosphate increases..the concentration of what subsequently increases?
Definition
glucose 6-phosphate also increases
Term
high concentrations of _____ inhibit hexokinase
Definition
glucose 6-phosphate
Term
Describe the pyruvate kinase
Definition
its a homotetrameric enzyme. its R state and T state respectively have higher and lower affinities for PhosphoEnol Pyruvate.
Term
What binds to PK at its allosteric regulatory site to inhibit its activity
Definition
ATP
Term
What is the positive regulator of Pyruvate Kinase? and how does it regulate PK?
Definition
F16BP, binds to allosteric site - induces conformational change which increases affinity of catalytic site for phosphoenol pyruvate (stabilizes R state)
Term
High concentrations of _____ increase pyruvate kinase activity; thus the activity of pyruvate kinase is coupled to the activity of
Definition
f16bp; PFK
Term
What is the first committed step in the glycolysis pathway?
Definition
Fructose 1,6 Biphosphate
Term
Which step needs NAD+ in the glycolysis pathway?
Definition
Glyceraldehyde 3 phosphate dehydrogenase
Term
HK, PGI, PFK, ALD, TPI, GPD, PGK, PGM, ENO, PK
Definition
hexokinase, phosphate glucose isomerase, phosphofructokinase, aldolase, triose phosphate isomerase, glyceraldehyde 3 phosphate dehydrogenase, phosphoglycerate kinase, phosphoglycerate mutase, enolase, pyruvate kinase
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