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Biochemistry
Metabolism
200
Biochemistry
Graduate
01/17/2014

Additional Biochemistry Flashcards

 


 

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Term
kinase
Definition
uses ATP to add high-energy phosphate
Term
phosphorylase
Definition
adds inorganic phosphate
Term
phosphatase
Definition
removes phosphate group
Term
dehydrogenase
Definition
oxidizes substrate
Term
carboxylase
Definition
transfers CO2 with biotin
Term
which cells lack sorbitol dehydrogenase
Definition
schwann, lens, retina, and kidneys
Term
cells have both aldose reductase and sorbitol dehydrogenase
Definition
liver, ovaries and seminal vesicles
Term
glucose -> sorbitol
Definition
aldose reductase
Term
sorbitol -> fructose
Definition
sorbitol dehydrogenase
Term
RLE for glycolysis
Definition
phosphofructokinase
Term
RLE for glucoeogenesis
Definition
fructose-1,6-BP
Term
RLE for TCA
Definition
isocitrate dehydrogenase
Term
RLE for glycogen synthesis
Definition
glycogen synthase
Term
RLE for glycogenolysis
Definition
glycogen phosphorylase
Term
RLE for HMP shunt
Definition
G6PD
Term
RLE for pyrimidine synthesis
Definition
CPS II
Term
RLE for purine synthesis
Definition
glutamine-PRPP amidotransferase
Term
RLE for urea cycle
Definition
carbamoyl phosphate synthetase I
Term
RLE for fatty acid synthesis
Definition
acetyl-CoA carboxylase
Term
RLE for fatty acid oxidation
Definition
carnitine acyltransferase I
Term
RLE for ketogenesis
Definition
HMG-CoA synthase
Term
RLE for cholesterol synthesis
Definition
HMG-CoA reductase
Term
glucose -> glucose-6-phosphate
Definition
glucokinase/hexokinase
Term
fructose-6-phosphate -> fructose-1,6-BP
Definition
phosphofructokinase
Term
PEP -> pyruvate
Definition
pyruvate kinase
Term
pyruvate -> acetyl- CoA
Definition
pyruvate dehydrogenase
Term
glucose-6-phosphate -> glucose
Definition
glucose-6-phosphatase
Term
fructose-1,6-BP -> fructoose-6-phosphate
Definition
fructose-1,6-BP
Term
pyruvate -> OA
Definition
pyruvate carboxylase
Term
OAA -> PEP
Definition
PEP carboxylase
Term
most common glycolysis deficiency enzyme
Definition
pyruvate kinase
Term
glyclosis deficiency presentation
Definition
hemolytic anemia
Term
malate shuttle yields ___ ATP
Definition
32
Term
glycerol-3-phosphate yields ___ ATP
Definition
30
Term
anaerobi glycolysis yields ___ ATP
Definition
2
Term
Hexo vs glucokinase: low Km
Definition
hexokinase
Term
Hexo vs glucokinase: high Km
Definition
glucokinase
Term
Hexo vs glucokinase: low Vmax
Definition
hexokinase
Term
Hexo vs glucokinase: high Vmax
Definition
glucokinase
Term
Hexo vs glucokinase: induced by insulin
Definition
glucokinase
Term
Hexo vs glucokinase: in all cells
Definition
hexokinase
Term
Hexo vs glucokinase: liver and beta cells
Definition
glucokinase
Term
inhibition of hexokinase
Definition
glucose-6P
Term
inhibition of glucokinase
Definition
fructose-6P
Term
activation of phosphofructokinase
Definition
AMP, fructose-2,6-BP
Term
inhibition of phosphofructokinase
Definition
ATP, citrate
Term
inhibition of pyruvate kinase
Definition
ATP, alanine
Term
activation of pyruvate kinase
Definition
fructose-1,6-BP
Term
pyruvate dehydrogenase inhibtion
Definition
ATP, NADH, acetyl0-CoA
Term
increased glucagon effect on glycolysis
Definition
less (less PFK2)
Term
increased insulin effect on glycolysis
Definition
more glycolysis (more PFK2)
Term
cofactors for pyruvate dehydrogenase
Definition
thiamine, Lipoic acid, CoA, FAD, NAD
Term
vomiting, rice water stools, garlic breath
Definition
arsenic poisoning
Term
arsenic inhibits
Definition
lipoic acid
Term
pyruvate dehydrogenase activated by
Definition
NAD, ADP, Ca
Term
sites of G6PD
Definition
mammary glands, liver, adrenal cortex and RBCs
Term
glucose-6-p -> ribulose-5-P
Definition
G6PD
Term
ribulose-5-P is used for ____
Definition
nucleotide synthesis
Term
ribulose-5-P -> ribose-6-P
Definition
trasnketolase
Term
oxidative burst enzymes in neutrophils
Definition
O2 --NADPH oxidase--> O2- --Superoxide dismuates--> H2O2 --myeloperoxidase--> HOCl-
Term
CGD increased infection with
Definition
catalase+ organisms
Term
heinz bodies and bite cells
Definition
G6PD deficiency
Term
G6PD deficiency
Definition
poor RBC defense against ROS -> hemolytic anemia
Term
ppts of hemolysis in G6PD deficiency
Definition
fava beans, sulfonamides, primaquine, anti-TB
Term
defect in fructokinase
Definition
essential fructosuria
Term
fructose in blood and urine
Definition
essential fructosuria
Term
deficiency of aldolase B
Definition
fructose intolerance
Term
hypoglycemia, jaundice, cirrhosis, vomiting
Definition
fructose intolerance
Term
fructose intoleranc tx
Definition
decrease intake of both fructose and sucrose
Term
deficiency of galactokinase
Definition
galactokinase deficiency
Term
galactose in blood and urine, infantile cataracts
Definition
galactokinase deficiency
Term
deficiency of galactose-1-phosphate uridyltransferase
Definition
classic galactosemia
Term
falure to thrive, jaundice, hepatomegaly, infantile cataracts, MR
Definition
classic galactosemia
Term
classic galactosemia tx
Definition
exclude galactose and lactose
Term
bloating, cramps and osmotic diarrhea
Definition
lactase deficiency
Term
symptoms of pyruvate dehydrogenase deficiency
Definition
lactic acidosis because backup of pyruvate and alanine
Term
tx of pyruvate dehydrogenase deficiency
Definition
increase intake of ketogenic nutrients (high fat or increased lysine and leucine)
Term
4 fates of pyruvate
Definition
alanine, lactate, OAA acetyl-CoA
Term
three regulated enzymes of TCA
Definition
citrate synthase, isocitrate dehydrogenase, alpha-KG dehydrogenase
Term
citrate synthase inhibition
Definition
ATP
Term
isocitrate dehydrognase
- inhibition
- activation
Definition
- ATP, NADH
- ADP
Term
alpha-KG dehydrogenase inhibition
Definition
succinyl-CoA, NADH, and ATP
Term
inhibition of complex I in electron transport chain
Definition
rotenone, amytal and MPP
Term
inhibition of complex II
Definition
antimycin A
Term
inhibition of complex IV
Definition
CN, CO, N3-, H2S
Term
effets of electron transport inhibitors
Definition
directly inhibit -> decrease proton gradient and block of ATP synthesis
Term
ATPsynthase inhibitors
Definition
ologmycin, increase proton gradient and no ATP produced because electron transport stops
Term
ex of uncoupling agents
Definition
2,4-DNP, ASA, thermogenin
Term
effects of uncoupling agents
Definition
increase permeability of membrane -> decrease proton gradient and increase O2 consumption
Term
Pyr -> OAA
Definition
pyruvate carboxylase
Term
OA ->PEP
Definition
PEP carboxykinase
Term
fructose-1,6-BP -> fructose-6P
Definition
fructose-1,6-bisophosphatase
Term
glucose-6-P -> glucoase
Definition
glucose-6-phsophatase
Term
which cells cannot participate in gluconeogenesis
Definition
mm
Term
odd and even FA difference
Definition
odd = can enter TCA, gluconeogenesis and as glucose source
even = only acetyl-CoA equivalents
Term
cori cycle
Definition
mm= glucose -> lactate
lactate in blood to liver
liver = lactate -> glucose
Term
alanine cycle
Definition
mm= glucose -> pyr -> ala
liver = ala -> pyruvate -> glucose
Term
two major carriers of Nitrogen
Definition
alanine and glutamine
Term
enzyme of alanine cycle
Definition
AST and ALT
Term
glucose-2-phosphatase deficiency
Definition
von gierkes
Term
severe fasting hypoglycemia
Definition
von gierke
Term
increase blood lactate
Definition
von gierke
Term
increase glycogen in liver, hepatomegaly
Definition
von gierke
Term
cardiomegaly
Definition
pompo (infantile)
Term
respiratory failure
Definition
pompe (adult)
Term
lysosomal alpha-1,4-glucosidase deficiency
Definition
pompe
Term
milk don von gierke with normal lactate
Definition
cori
Term
alpha-1,6-glucosidase deficiency
Definition
cori
Term
increased glycogen in mm
Definition
mcardles
Term
mm cramps, myoglobinuria with strenuous exercise
Definition
McArdle's
Term
skeeltaml mm glycogen phosphorylase deficiency
Definition
McArdle
Term
two ketone bodies
Definition
acetoacetate and beta-hydroxybutyrate
Term
ketone used in mm and brain
Definition
beta-hydroxybutyrate
Term
fruity odor breath
Definition
ketone bodies
Term
how are ketones metabolized by the brain
Definition
ketones -> acetyl-CoA
Term
what metabolic scenario favors the synthesis of ketone bodies?
Definition
acetyl-CoA exceeds O2 capacity of the TCA
Term
metabolism in fed state
Definition
glycolysis and aerobic respiration
Term
metabolism in fasting state between meels
Definition
glycogenolysis, gluconeogenesis, adipose release of FA
Term
starvation 1-3 days metabolism
Definition
glycogenolysis, FFA, gluconeogenesis
Term
starvation after day 3 metabolism
Definition
ketone bodies become main source of energy for brain and heart
Term
ornithing -> citrulline
Definition
ornithine transcarbamoylase
Term
location os CPS I
Definition
mitochondria
Term
essential amino acids
Definition
PVT TIM HALL = phe, Val, Trp, The, Ile, Met, His, Arg, Leu, Lys
Term
acidic amino acids
Definition
asp and glu
Term
basic amino acids
Definition
arg, lys and his
Term
causes of hyperammonemia
Definition
liver disease, urea cycle deficiency
Term
tremor, vomitin, slurring of speech, cerebral edema, blurring of vision
Definition
ammonia intoxication
Term
hyperammonemia tx
Definition
benzoate or phenylbutyrate, lactuloase = hepatic encephalopathy
Term
most common urea cycle disorder
Definition
ornithin transcarbamoylase deficiency
Term
orotic acid in blood and urine, decreased BUN, increased NH4
Definition
Term
derivative: tyrosine
Definition
phe
Term
derivative: dopa
Definition
phe
Term
derivative: dopamine
Definition
phe
Term
derivative: niacin
Definition
trp
Term
derivative: serotonin
Definition
trp
Term
derivative: melotonin
Definition
trp
Term
derivative: thyroxine
Definition
phe
Term
derivative: melanin
Definition
phe
Term
derivative: histamine
Definition
his
Term
derivative: heme
Definition
glycine
Term
derivative: porphyrin
Definition
glycine
Term
derivative: creatine
Definition
arginine
Term
derivative: urea
Definition
arginine
Term
derivative: nitric oxide
Definition
arginine
Term
derivative: GABA
Definition
glutamate
Term
derivative: glutathione
Definition
glutamate
Term
derivative: SAM
Definition
methionine
Term
location of FA synthesis
Definition
cytoplasm
Term
location of beta-oxidation
Definition
mitochondria
Term
weakness, hypoketotic hypoglycemia
Definition
carnitine deficiency
Term
increased dicarboxylic acids, increased glucose and ketones
Definition
acyl-coa dehydrogenase deficiency
Term
HMG-CoA -> mevaolonate
Definition
HMG-CoA reductase
Term
what inhibits HMG-CoA reductase?
Definition
statins
Term
location of apoE
Definition
chylomicron, remnant, VLDL, IDL, HDL
Term
mediates remnant uptake
Definition
apoE
Term
activates LCAT
Definition
apoAI
Term
lipoprotein lipase cofactor
Definition
apoCII
Term
mediates chylomicron secretion
Definition
apoB48
Term
binds LDL receptor
Definition
apoB100
Term
location of apoAI
Definition
chylomicron, HDL
Term
location of apoCII
Definition
chylomicron, VLDL
Term
location of apoB48
Definition
chylomicron, remnant
Term
location of apoB100
Definition
VLDL, IDL, LDL
Term
delivers dietary TGs to peripheral tissue
Definition
chylomicron
Term
secreted by intestinaal epithelial cels
Definition
chylomicron
Term
delivers hepatic TGs to peripheral tissue
Definition
VLDL
Term
secreted by liver
Definition
VLDL
Term
delivers TG and cholesterol to liver
Definition
IDL
Term
formed from VLDL
Definition
IDL
Term
delivers hepatic cholesterol to peripheral tissue
Definition
LDL
Term
from VLDL via LPL
Definition
LDL
Term
reverse cholesterol transport from periphery to liver
Definition
HDL
Term
acts as a repository for apoC and apoE
Definition
HDL
Term
secreted from liver and intestine
Definition
HDL
Term
increased chylomicrons
Definition
type I = hyperchylomicronemia
Term
deficiency in hyperchylomicronemia
Definition
lipoprotein lipase deficiency or altered apolipoprotein CII
Term
pancreatitis, hepatosmplenomegaly and eruptive xanthomas
Definition
type I = hyperchylomicronemia
Term
increased LDL
Definition
type II = familial hypercholesterolemia
Term
deficiency in familial hypercholesterolemia
Definition
decreased LDL receptor
Term
accelerated atherosclerosis, tendon anthems an corneal ulcers
Definition
type II = familial hypercholesterolemia
Term
increased VLDL
Definition
type IV = hypertriglyceridemia
Term
hepatic overproduction of VLDL leading to pancreatitis
Definition
type IV = hypertriglyceridemia
Term
accumulation of fats in enterocyte because cannot export as chylomicrons
Definition
abetalipoproteinemia
Term
failure to thieve, acanthocytosis, steatorrhea, ataxia and night blindness
Definition
abetalipoproteinemia
Term
phe -> tyr
Definition
phenyalanine hydroxylase
Term
tyr -> Dopa
Definition
tyrosine hydroxylase
Term
dopa -> dopamine
Definition
dopa decarbxsylase
Term
activated by cortisol
Definition
NE -> epi
Term
phenylkenonuria deficiency
Definition
phenylalanine hydroxylase or decreased tetrahydrobiopterin
Term
mental retardation, eczema, seizures, must body odor, fair skin
Definition
phenylketonuria
Term
microcephaly, growth retardation, congenital heart defects
Definition
infant with maternal PKU
Term
deficiency in alkaptonuria
Definition
hoogentisic acid oxidase
Term
dark CT, browht sclera, urine turns black
Definition
alkaptonuria
Term
albinism deficiency
Definition
tyrosinase or defectiv eytrosine transporters
Term
mental retardation, tal stature, lens sublux, atherosclerosis
Definition
homocysteinuria
Term
homocystinuria deficiencies
Definition
1- cystathionine synthase
2- dec affinity of cystathionine synthase for pyridoxal phosphate
3- homocysteine methyltransferase deficiency
Term
cystinuria defect
Definition
PCT of the kidneys
Term
blocked degradation of branched AA (Ile, Leu, Val)
Definition
maple syrup urine disease
Term
sweet urine, mental retardation, death
Definition
maple syrup urine disease
Term
hartnup
Definition
defective AA transporter on renal and intestinal cells -> pellagra
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