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Biochemistry
vocabs for biochemistry
74
Biology
11th Grade
09/26/2012

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Term
frequent elements in living things
Definition
Carbon, Hydrogen, Oxygen and Nitrogen.
Term
Other elements needed by living things
Definition
Calcium, Sulphur, Phosphorous, Iron and Sodium
Term
What makes up a DNA?
Definition
CHON+P
Term
Water
Definition
has uneven distribution of charge. (polar)
Term
Properties of water
Definition
Hydrogen Bonds, Thermal, cohesive and solvent.
Term
adhesion
Definition
water molecules sticks to other substances.
Term
Cohesion
Definition
water molecules sticks to itself (together).
Term
High Specific Heat Capacity
Definition
it means that i can cool us. Ex: evaporating sweat takes heat away from body
Term
Organic
Definition
Has Carbon in it
Term
Inorganic
Definition
Does not have Carbon (oxides and carbonates don't count)
Term
Water's solvent properties
Definition
substances dissolved in it can react with one another
Term
Water in a solid form (ICE)
Definition
crystalline structure, organized and many space
Term
Water in a liquid form
Definition
less organized, more dense, packed in and no space
Term
Sulphur
Definition
important element in some amino acids. allows disulphide bonds to form in proteins, influencing the protein shape
Term
Iron
Definition
in hemoglobin (to carry oxygen in blood)
Term
Calcium
Definition
bones
Term
Sodium
Definition
important for nerve impulses
Term
Phosphorous
Definition
in ATP and in phospholipids in cell membranes and in DNA
Term
Anabolic reaction
Definition
builds up molecules
Term
Catabolic reaction
Definition
break down molecules
Term
peptide bonds
Definition
bonds between amino acids
Term
glycosidic bonds
Definition
bonds between carbohydrates
Term
ester bonds
Definition
bonds between glycerol and fatty acids; makes triglyceride
Term
animal: mono-
Definition
glucose, galactose
Term
animal: di-
Definition
lactose, maltose
Term
animal: poly-
Definition
glycogen
Term
plant: mono-
Definition
fructose
Term
plant: di-
Definition
sucrose
Term
plant: poly-
Definition
cellulose, starch
Term
single bonds
Definition
saturated fats
Term
double bonds
Definition
unsaturated fats
Term
amount of energy in CARBOHYDRATES
Definition
17KJg-1
Term
amount of energy in FATS
Definition
38KJg-1
Term
amount of energy in PROTEINS
Definition
13KJg-1
Term
function of lipids
Definition
energy storage, thermal insulation, buoyancy, protection, hormones, solvent, nervous function, plasma membrane
Term
DNA
Definition
Deoxyribonucleic acid
Term
Nucleotide
Definition
consists of a phosphate, sugar(deoxyribose) and base
Term
Purines
Definition
double ring. Adenine, Guanine
Term
Pyramidines
Definition
single ring. Thymine, Cytosine
Term
complementary base pairing
Definition
A,T and C,G are bases that complement each other. A and T (double bond), C and G (triple bond) always come together
Term
Antiparallel Stands
Definition
they are parallel, but run in opposite directions (this causes the double helix)
Term
DNA Backbone
Definition
phosphate + sugar
Term
*Triplets
Definition
Bases are read in groups of three
Term
5-prime (5')
Definition
the end nearest carbon number 5. (one side has carbon5 up and carbon 3 down)
Term
3-prime (3')
Definition
carbon3 is up and carbon5 is down
Term
Histone proteins
Definition
curling rod for DNA (8 histone molecules)
DNA curls around histones (supercoliling)
Term
sister chromatids
Definition
each chromatid are identical to each other
Term
EXONS
Definition
useable parts of DNA
Term
Highly repetitive Sequences
Definition
repeat the same gene over and over again (why? perhaps for safety repetition)
Term
P-arm
Definition
shorter arm of the chromosome
Term
Q-arm
Definition
longer arm of the chromosome
Term
Centromere
Definition
the center of the chromosome
Term
INTRONS
Definition
junk DNA
Term
condon
Definition
sequences of 3 bases (get codon by copying a triplet of DNA)
Term
anticodon
Definition
complementary to the 3bases of a codon
Term
the genetic code
Definition
-a codon designates an amino acid
-an amino acid may have more than one codon
-there are 20 a.a, but 64possible codons
-some codons tell the ribosome to stop translating
Term
mRNA (messenger RNA)
Definition
copies DNA's code and carries the genetic information to the ribosomes
Term
rRNA (ribosomal RNA)
Definition
along with protein, makes up the ribosomes. rRNA+protein= ribosome
Term
tRNA (transfer RNA)
Definition
transfers amino acids to the ribosomes where proteins are synthesized
Term
start codon
Definition
AUG (methionine)
Term
stop codon
Definition
UAA, UAG, UGA
Term
RNA polymerase
Definition
during transcription, binds to DNA and separates the DNA strands
-uses one strand of DNA as the template to assemble nucleotides into RNA
Term
promoters
Definition
regions on DNA that show where the RNA polymerase must bind to begin the transcription of RNA
Term
Enzyme
Definition
usually made of a protein but doesn't get consumed in the reaction. Actually, part of the reaction. Allows the reaction to speed up and lower the activation energy
Term
Catalase
Definition
one of the primary enzymes, breaks down H2O2 (hydrogen peroxide) in O2 and H2O
(one catalase can process 40million per second)
Term
Cofactor
Definition
inorganic ex) Heme
if we have an enzyme that needs a cofactor, it's just a globular protein doing nothing until cofactor bonds to the appropriate spot
Term
Coenzyme
Definition
organic ex) Thiamine= Vitamin B1

(basically same with cofactors, but built differently)
Term
Competitive inhibition
Definition
the substrate and the competitive inhibitor competes to land on the active site. the competitive inhibitor blocks the active site, thus the substrate cannot bond with the active site
Term
Allosteric (non-competitive inhibitor)
Definition
it'll bond with a different site and that'll alter the active site, thus, substrate does not function

(+also instead of changing the active site, the inhibitor can just cover the active site)
Term
Allosteric Activator
Definition
changes distorted active site to active site, thus substrate can bond (Non-fit ---> Fit)
Term
Factors affecting Enzymes
Definition
-Temperature (there are optimum temp/pH/concent. for enzymes)
-pH
-Concentration
Term
Denaturing of enzymes
Definition
enzyme not functioning anymore
Term
Renaturation
Definition
through renaturation, you can refold a denatured enzyme
Term
Glycolysis
Definition
-First step in cell respiration
- happens in cytoplasm
-input-2ATP
-output-4ATP
-net output-2ATP
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