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Biochem Week 9
Prelim III Terms
16
Chemistry
Undergraduate 3
04/14/2009

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Term
Site- Specific Recombination (9)
Definition
Reocombination limited to specific sequences, 20-200bp long; can result in an inversion or an insertion-deletion
Term
CRE Recombinase (9)
Definition
enzyme that allows for exchange of genetic information in small regions during site-specific recombination
Term
fljA (9)
Definition
gene for FlagellinA or FLjA of Salmonella; undersame promoter as fljB;
Term
fljB (9)
Definition
gene for FlagellinB or FLjB of Salmonella; under same promoter as fljA;
Term
fljC (9)
Definition
gene for FlagellinC or FLjC of Salmonella
Term
Hin Recombinase (9)
Definition
catalyzes the site-specific recombination that results in the inversion of the DNA that codes for the flagellar proteins;
Term
Flagellin A (9)
Definition
a repressor for the promoter off fljC
Term
Hin gene (9)
Definition
codes for Hin Recombinase; has inverted repeats on either side that is part of fljA and fljB genes; if repeat becomes flipped,it cannot be used. The Flagellin A cannot repress fljC, so Flagellin C is expressed
Term
Nonhomologous Recombination (9)
Definition
Recombination that allows the movement of transposable elements; aka “jumping genes”
Term
Direct Transposition
Definition
A piece of DNA (the transposon) can move itself by cutting itself from one region and pasting itself into another region; DOES NOT REQUIRE HOMOLOGY
Term
Direct Transposition Mechanism
Definition
Transposase excises the transposon with a staggered cut, finds a target and inserts; DNA ligase must ligate the gaps created by the staggered ends
Term
Replicative Transposition
Definition
The transposition is nicked and joined to the target to form an intermediate; thefree 3' hydroxyls can be used to start replication; results in 2 copies of transposons
Term
RAG1 and RAG2
Definition
recombination-activating genes that are able to cause the deletion of this intervening DNA
Term
replicon
Definition
a unit of replication that is replicated from a single origin; eukaryotes have a multiple numberofthem.
Term
Autonomously Replicating Sequences (ARS)
Definition
A segment of a DNA molecule necessary for the initiation of its replication; generally a site recognized and bound by the proteins of the replication system
Term
Meselson and Stahl Density Transfer (9)
Definition
Provides evidence for semi-conservative replication;bacterial cells grown in heavy and light nitrogen
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