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Biochem Quiz 5
Nitrogen Acquisition and Amino Acid Synthesis
47
Biochemistry
Undergraduate 4
04/08/2013

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Term
Nitrate reductase
Definition
reduces NO3 to NO2
Term
Nitrite reductase
Definition
reduces NO2 to NH4
Term
Nitrate reductase is located in __________.
Definition
cytosol
Term
rhizoba
Definition
symbiotic bacteria with plant
Term
ADP & NH4 inhibits ____________ of nitrogen reductase.
Definition
gene expression
Term
How many ATP are needed to reduce N2?
Definition
16 ATP
Term
The primary electron donor of nitrogen fixation is _____________.
Definition
reduced ferrodoxin
Term
All of these are required for nitrogen fixation except:
nitrogenase
reduced ferrodoxin
ATP
anaerobic conditions
All of these are necessary
Definition
All are required
Term
Carbamoyl phosphate synthetase I (CPS-1) converts _________ to _________.
Definition
NH4 to carbamoyl-phosphate
Term
Glutamate dehydrogenase (GDH) converts ____________ to _________ via amination.
Definition
alpha-ketoglutarate; glutamate
Term
Glutamine synthetase (GS) catalyzes the conversion of __________ to _________ via amidation.
Definition
glutamate; glutamine
Term
Glutamate synthase (GS) catalyzes ________________ and ____________ to form two glutamates.
Definition
alpha-ketoglutarate; glutamine
Term
Feedback inhibition of Glutamine Synthase regulation involves all of the following except:
Gly
Ser
His
Trp
CTP
Thr
AMP
G6P
Definition
Thr
Term
List the nonessential amino acids.
Definition
Ala, Asp, Asn
Tyr
Cys
Pro
Gly, Gln, Glu
Ser
Term
True or false: the glutamate-dependent transamination of alpha-ketoglutarate is the primary mechanism for amino acid synthesis.
Definition
True
Term
alpha-ketoglutarate family
Definition
Glu, Gln, Arg, Pro, Lys
Term
The urea cycle is linked to the tricarboxylic acid cycle by ___________.
Definition
fumarate
Term
Aspartate family
Definition
Thr, Met, Lys, Asn
Term
___________ converts methionine to _____________.
Definition
s-adenosylmethionine synthase; SAM
Term
Pyruvate family
Definition
Ala, Val
Term
3-Phosphoglycerate family
Definition
Ser, Gly, Cys
Term
3-phosphoglycerate dehydrogenase diverts 3-PG from glycolysis to form ________.
Definition
3-PHP
Term
Chorismate is the foundation for which amino acids?
Definition
aromatic (Phe, Tyr, Trp)
Term
Which enzyme has channels to accomodate the intense non-polarity of its intermediate?
Definition
Tryptophan synthase
Term
What is the active chemical in RoundUp?
Definition
glyphosphate
Term
Which amino acids are purely ketogenic?
Definition
Leu and Lys
Term
Tyrosine degrades to form ________ and __________ for the citric acid cycle.
Definition
acetoacetate and fumarate
Term
Leucine degrades to form ___________ and ______ for ketogenesis.
Definition
acetyl-CoA and acetoacetate
Term
Ile, Met, and Val are degraded to __________ and then ___________ to enter into the TCA cycle
Definition
propionyl-CoA; succinyl-CoA
Term
Which amino acids can be converted into fumarate?
Definition
Asp, Phe, and Tyr
Term
What is nitrogen fixation?
Definition
conversion of N2 to NH4
Term
Nitrate assimilation occurs in two steps: reduction of nitrate to form __________ and further reduction to __________.
Definition
nitrite; ammonia
Term
All N2-fixing systems are nearly identical and have all of the requirements EXCEPT:
a. ATP.
b. O2-free conditions.
c. the enzyme nitrogenase.
d. strong reductant such as ferredoxin.
e. all of the above are requirements.
Definition
E. All are requirements
Term
Control over nitrogenase activity is accomplished by which of the following?
A. ATP serves as an allosteric activator
B. AMP serves as an allosteric inhibitor
C. NH4+ prevents expression of the genes that encode nitrogenase
D. ADP serves as an allosteric activator
E. none of the above
Definition
C. NH4 prevents expression of genes
Term
What reaction does glutamate dehydrogenase (GDH) catalyze?
A. The reductive amination of beta-ketoglutarate to yield glutamate.
B. Phosphorylation of carbamate to yield carbamoyl-phosphate.
C. The amidation of the gamma-carboxyl group of glutamate to form glutamine.
D. The deadenylation of glutamine synthetase.
E. The adenylation of glutamine synthetase.
Definition
A. reductive amination of beta-KG to yield glutamate
Term
Glutamine synthetase (GS) requires ATP. [T/F]
Definition
True
Term
All of the following act in feedback inhibition of glutamine synthetase (GS) in prokaryotes EXCEPT:
A. AMP
B. proline
C.glucosamine-6-phosphate.
D.CTP.
E. histidine.
Definition
proline
Term
In plants and microorganisms, amino acid biosynthesis is a matter of synthesizing the appropriate __________ followed by transamination with __________.
a. acetyl-CoA derivatives; glutamine
b. -ketoacid; glutamate
c. phospho-carbon skeleton; alanine
d. none are true
Definition
B
Term
Ornithine has three roles. Name them.
Definition
1) Precursor to ARG
2) Intermediate in Urea Cycle
3) Intermediate in ARG degradation.
Term
The Urea cycle is linked to the TCA cycle by ________________
Definition
fumarate
Term
Aspartate (ASP) is formed from transamination of:
A. asparagine. D. citrate
B. aspartame. E. -ketoglutarate
C. Oxaloacetate
Definition
oxaloacetate
Term
_________________ catalyzes the reaction of methionine with ATP to form ______________________.
Definition
S-adenosylmethionine synthase; S-adenosylmethionine (SAM)
Term
Ser, Thr and Cys are all derived from 3-phosphoglycerate. [T/F]
Definition
False
Term
Chorismate is the common precursor of what three amino acids.
Definition
1) Trp 2) Tyr 3) Phe
Term
The term ketogenic amino acids refers to amino acids:
A. that are precursors for glucose synthesis.
B. that can be converted to fatty acids or ketone bodies.
C. that can not be converted to fatty acids or ketone bodies.
D. none of the above.
Definition
B. that can be converted to fatty acids or ketone bodies.
Term
Valine, isoleucine, and methionine are converted via __________ to _______________ for entry into the citric acid cycle.
Definition
propionyl-CoA; succinyl-CoA
Term
Leucine is degraded to _________________ and ____________.
Definition
Acetyl-CoA; Acetoacetate
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