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Biochem - Metabolism
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24
Biochemistry
Professional
05/20/2014

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Term
Where does glycolysis take place in the cell?
Definition
cytoplasm
Term
What is the rate-limiting enzyme of glycolysis?
Definition
phosphofructokinase (PFK-1)
(catalyzes F-6-P to F-1,6-P)
+ regulators: AMP, fructose-2,6-BP
- regulators: ATP, citrate
Term
Where does gluconeogenesis take place in the cell?
Definition
both mitochondria and cytoplasm (liver, kidney, intestine)
-first step takes place in the mitochondria (pyruvate to oxaloacetate catalyzed by pyruvate carboxylase)
-the rest of the rxns take place in the cytosol
Term
What is the rate-limiting enzyme of gluconeogenesis?
Definition
Fructose-1,6-bisphosphatase
+ regulators: ATP
- regulators: AMP, fructose-2,6-BP
Term
Where does the TCA cycle take place in the cell?
Definition
mitochondria
Term
What is the rate-limiting enzyme of the TCA cycle?
Definition
Isocitrate dehydrogenase
(catalyzes isocitrate to a-ketoglutarate)
+ regulators: ADP
- regulators: ATP, NADH
Term
Where does glycogenesis and glycogenolysis take place in the cell?
Definition
cytoplasm (muscle, liver, adipose tissue)
Term
What is the rate-limiting enzyme of glycogenesis?
Definition
glycogen synthase
(adds glucose units to nonreducing ends of existing glycogen chain in alpha-1,4 linkages)
+ regulators: glucose, insulin
- regulators: epi, glucagon
Term
What is the rate-limiting enzyme of glycogenolysis?
Definition
glycogen phosphorylase
(breaks alpha-1,4 linkages)
+ regulators: AMP, epi, glucagon
- regulators: insulin, ATP
Term
Where does the HMP shunt (pentose-phosphate pathway) take place in the cell?
Definition
cytoplasm (liver, adrenal cortex, lactating mammary glands)
Term
What is the rate-limiting enzyme of HMP shunt?
Definition
glucose-6-phosphate dehydrogenase (G6PD)
(catalyzes G-6-P to 6-phosphogluconate using NADP+)
+ regulators: NADP+
- regulators: NADPH
Term
Where does de novo purine and pyrimidine synthesis take place in the cell?
Definition
cytoplasm in cells of all tissues
Term
What is the rate-limiting enzyme of de novo pyrimidine synthesis?
Definition
carbamoyl phosphate synthetase II
(catalyzes the combination of CO2 with glutamine to form carbamoyl phosphate)
+ regulators: UTP
- regulators: ATP PRPP
Term
What is the rate-limiting enzyme of de novo purine synthesis?
Definition
glutamine-PRPP amidotransferase
(catalyzes an addition of an alpha-amino group to PRPP from glutamine to form 5-phosphoribosylamine)
+ regulators: none
- regulators: AMP, IMP, GMP
*MTX is a folic acid analog that inhibits the formation of THF, thus interferes with de novo purine synthesis
Term
Where does the urea cycle take place in the cell?
Definition
both mitochondria and cytoplasm
Term
What is the rate-limiting enzyme the urea cycle?
Definition
carbamoyl phosphate synthetase I
(catalyzes formation of carbamoyl phosphate from NH4+, CO2, and ATP)
+ regulators: N-acetylglutamate
Term
Where does fatty acid synthesis take place in the cell?
Definition
cytoplasm
Term
What is the rate-limiting enzyme in fatty acid synthesis?
Definition
acetyl-CoA carboxylase (ACC)
(catalyzes the conversion of acetyl CoA to malonyl CoA)
+ regulators: insulin, citrate, glucagon
- regulators: palmitoyl-CoA
Term
Where does fatty acid oxidation (B-oxidation) take place in the cell?
Definition
mitochondria
Term
What is the rate-limiting enzyme in fatty acid oxidation?
Definition
Carnitine acyltransferase I
(catalyzes the transfer of a fatty acyl to carnitine which is able to cross the mitochondrial membrane)
- regulators: malonyl-CoA
Term
Where does ketogenesis occur in the cell?
Definition
Term
What is the rate-limiting enzyme in fatty acid oxidation?
Definition
HMG-CoA synthase
(catalyzes the production of HMG CoA from acetyl CoA and acetoacetyl CoA)
Term
Where does cholesterol synthesis occur in the cell?
Definition
cytoplasm
Term
What is the rate-limiting enzyme in cholesterol synthesis?
Definition
HMG-CoA reductase
(catalyzes the production mevalonic acid from HMG CoA)
+ regulators: insulin, thyroxine
- regulators: glucagon, cholesterol
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