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Bio Final
Final
691
Biology
10th Grade
06/11/2012

Additional Biology Flashcards

 


 

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Term
Early scientists thought ______ was the cell’s hereditary material because it was more ______ than DNA
Definition
Early scientists thought protein was the cell’s hereditary material because it was more complex than DNA
Term
Fred Griffith
Definition
Study suggested that DNA was probably the genetic material
Term
Chromosomes are made of both ______ and _____
Definition
Chromosomes are made of both DNA and protein
Term
Hershey & Chase
Definition
Proved that DNA was the cell’s genetic material
Term
Erwin Chargaff
Definition
Showed the amounts of the four bases on DNA ( A,T,C,G)
Term
_______ must pair with Thymine
Guanine must pair with _______
Definition
Adenine must pair with Thymine
Guanine must pair with Cytosine
Term
AT CG form what kind of bonds
Definition
Weak hydrogen bonds
Term
Rosalind Franklin
Definition
Took diffraction x-ray photographs of DNA crystals
Term
Watson & Crick
Definition
Built the first model of DNA using Franklin’s x-rays
Term
Two strands of DNA coiled called a
Definition
Double Helix
Term
Sides of DNA made of
Also known as
Definition
Deoxyribose bonded to phosphate (PO4)
Legs of Ladder
Term
Center of DNA made up
Also know as
Definition
Nitrogen bases bonded together by weak hydrogen bonds
Rungs of Ladder
Term
Most DNA has a ____-hand twist with ____ base pairs in a complete turn
Definition
Right hand twist
10 base pairs in completer turn
Term
Hot spots occur where right and left twisted DNA meet producing ______
Definition
Mutations
Term
Left twisted DNA is called Z-DNA or _____ DNA
Definition
southpaw
Term
DNA is made up of
Definition
Nucleotides
Term
Nucleotides (Make up DNA) made up of
1.
2.
3.
Definition
1.Phosphate group
2.5-carbon sugar
3.Nitrogenous base
Term
How are Carbons numbered?
Definition
Clockwise from 1' to 5'
Term
DNA are known as Antiparallel Strands because if one strand goes from 5' to 3' the other is ______ in direction and goes from ____ to _____
Definition
Opposite in direction gores from 3' to 5'
Term
How do you tell if the Bases are Purines?
Which are the Purine bases?
Definition
Double Ring
Adenine (A)
Guanine (G)
Term
How do you tell if the Bases are Pyrimidines?
Which are the Pyrimidines bases?
Definition
Single Ring
Thymine (T)
Cytosine (C)
Term
Purines only pair with ______
Definition
Pyrimidines
Term
______ (#) hydrogen bonds required to bond Guanine & Cytosine
Definition
3
Term
______ (#) hydrogen bonds are required to bond Adenine & Thymine
Definition
2
Term
DNA has to be ______ before a cell divides
Definition
Copied
Term
DNA is copied during the ____ or _______ phase of _________
Definition
DNA is copied during the S or synthesis phase of interphase
Term
Where does Synthesis take place?
Definition
Nucleus of eukaryotes
Term
DNA replication begins at _____ ___ _______
Definition
Begins at Origins of Replication
Term
Two strands open forming Replication _____
What happens here?
Definition
Two strands open forming Replication Forks
New strands grow at the forks
Term
As the 2 DNA strands open at the origin, _______ Bubbles form.
Prokaryotes (bacteria) have _______ bubble(s)
Eukaryotic chromosomes have ______ bubble(s)
Definition
Replication Bubbles
Prokaryotes (bacteria) have a single bubble
Eukaryotic chromosomes have MANY bubbles
Term
Enzyme ____ ________ unwinds and separates the 2 DNA strands by breaking the weak hydrogen bonds
Definition
DNA Helicase
Term
Single-Strand Binding Proteins attach and keep the 2 DNA strands _______ and ______
Definition
Separated and untwisted
Term
Topoisomerase
Not really important
Definition
Relieves stress on DNA as it separates
Term
Before new DNA strands can form, there must be____ _______ present to start the addition of new nucleotides
Definition
RNA primers
Term
_______ is the enzyme that synthesizes the RNA Primer
Definition
Primase
Term
DNA polymerase can then add the new ________
Definition
Nucleotides
Term
DNA polymerase can only add nucleotides to the _____ end of the DNA
This causes the NEW strand to be built in a ___ to ____ direction
Definition
3'

This causes the NEW strand to be built in a 5’ to 3’ direction
Term
The ______ _____ is synthesized as a single strand from the point of origin toward the opening replication fork
Definition
Leading Strand
Term
The ______ _____ is synthesized discontinuously against overall direction of replication
Definition
Lagging Strand
Term
This strand is made in MANY short segments It is replicated from the replication fork toward the origin
Definition
Lagging Strand
Term
________ ________ - series of short segments on the lagging strand
Definition
Okazaki Fragments
Term
Okazaki Fragments must be joined together by __ _______ called ______
Definition
An enzyme called Ligase
Term
DNA polymerase initially makes about 1 in _______ base pairing errors
______ proofread and correct these mistakes
The new error rate for DNA that has been proofread is 1 in ___ ______ base pairing errors
Definition
10,000

Enzymes proofread and correct these mistakes

The new error rate for DNA that has been proofread is 1 in 1 billion base pairing errors
Term
Meselson & Stahl
Definition
New DNA consists of 1 PARENTAL (original) and 1 NEW strand of DNA
Term
What characteristics makes something a "living thing"?
Definition
Cells
Organization
Energy/Metabolism
Growth
Development
Reproduction
Display Heredity
Maintain Homeostasis
Response to their environment
Evolve and Adapt
Term
Experimental Group
Definition
The group in which you do not know what will happen
Term
Control Group
Definition
The group in which you know what will happen
Term
Dependent Variable (Where would you put it on a graph)
Definition
The thing you are counting
Y Axis
Term
Independent Variable (Where would you put it on a graph)
Definition
What you change between the control and experimental groups
X Axis
Term
Polarity
Definition
A particle having partial positive and partial negative charges
Term
Specific Heat Capacity
Definition
The amount of energy required to heat an object
Term
Three types of organic molecules (Nutrient)
Definition
Proteins, Carbs, and Lipids
Term
Proteins
Subunit
Function
Elements always present
Definition
Amino Acid
Cellular machines, engines, & buildings
Carbon Hydrogen Oxygen Nitrogen
Term
Carbs
Subunit
Function
Elements always present
Definition
Monosaccharides or Sugars
Short-term energy storage
Hydrogen, Carbon and Oxygen
Term
Lipids
Subunit
Function
Elements always present
Definition
fatty acids and glycerol
Stores Energy & Keeps animals warm and repel water
Carbon, Hydrogen, Oxygen
Term
What is a dehydration synthesis (condensation) reaction?
Definition
A + B = AB + H20
Term
What is a hydrolysis reaction?
Definition
H20 + AB = A + B
Term
List several characteristics of enzymes
Definition
Proteins, large, have active site, catalysts, denature at certain PHs
Term
How do you name an enzyme?
Definition
Take off ending and add -ase
Example
Sucrose=Sucrase
Term
How do organelles exhibit "division of labor"
Definition
Organelles in cells have different jobs
Term
Four structural differences between plant and animal cells
Definition
Cell wall, centriole, central vacuole, chloroplasts
Term
What is meant by cell specialization?
Definition
Different cells have different functions
Term
Thylakoid
Definition
Inner membrane folds into the cavity creates coin. Inside of which considered mitochondrial matrix
Term
Granum
Definition
Stack of thylakoids
Term
Stroma
Definition
Inner fluid Cavity
Term
Carbon assimilation
Definition
How fast you make sugar
Term
Light Dependent Reaction formula
Which are energized?
Which are used in Dark Reactions
Definition
Light Energy + Lots ADP + Lots Pi + Lots NADP+ + Lots H20 =
Lots O2 + Lots H+ + Lots ATP +Lots NADPH
Light energy, ATP, NADPH are energized
ATP and NADPH used in dark
Term
What is ironic about the name dark reaction
Definition
Only occurs in light
Term
Light independent reaction formula
Definition
6 CO2 + Lots ATP + Lots NADPH =
C6H12O6 + Lots ADP + Lots Pi + Lots NADP+
Term
What does Chlorophyll a absorb?
Reflect?
Located?
Definition
Absorbs blue-violet and red
Green
P680
Term
What does Chlorophyll b absorb?
Reflect?
Definition
Absorbs blue-violet and red-orange
Green
Term
What do Carotenoids absorb?
Reflect?
What is Xanthophyll
Definition
Absorbs blue-violet and blue-green
Red, orange, and yellow
Type of carotenoid with oxygen
Term
What type of macromolecule contains Chlorophyll a,b and carotenoids
Definition
Lipids
Term
Accessory & antenna pigments
Definition
Other pigments that absorb light besides Chlorophyll a and Chlorophyll b
Term
Photosystem
Definition
Group of pigments that work together
Term
Photophosphorylation
Definition
Process of making ATP using light energy
Term
Light hits ______ which send ______ to other _______
Definition
Light hits pigments which send energy to other pigments
Term
The light ______ ends at the _____ ______ _______ which sends an _____ to the _____ acceptor
Definition
The light energy ends at the Reaction center Chlorophyll which sends an electron to the electron acceptor
Term
Function of Light Reactions
Location too
Definition
Absorb light energy & make ATP & NADPH
Membrane of thylakoid
Term
The names 680 & 700 actually stand for
Definition
wavelengths
Term
What is the electron donor in light reactions?
Definition
Water
Term
Two other names for PSII
What step is it in light reaction?
Definition
Photosystem 2 or P680
Step 1
Term
Two other names for PSI
What step is it in light reaction?
Definition
Photosystem 1 or P700
Step 3
Term
What step occurs between PSII and PSI in light reactions
Definition
Electron transport chain
Term
What step in light reaction is NADP Reductase and what does it do?
Definition
Step 4
Passes new NADPH?
Takes NADP+ to dark reactions & puts e- on it
Term
Which end products from the light reactions are used in the dark reactions
Definition
ATP & NADPH
Term
During light reactions, hydrogens move from ______ to _______
Definition
Stroma to lumen
Wouldn't worry too much about this
Term
Chemiosmosis
Definition
Refers to process where hydrogens are pumped & the ATP are made
Term
Reactants of Dark Reactions (Calvin Cycle)
Definition
NEED LIGHT
3 RuBP + 3CO2 + 9 ATP + 6NADPH
Term
How many RuBP for one glucose?
Definition
6
Term
Products of Dark Reactions (Calvin Cycle)
Definition
1 G3P + 6NADP+ + 9 Pi + 9ADP
Term
How many of the _G3P per one ____ are used to make a ____?
Definition
6G3P per one CO2 are used to make a sugar
1G3P used to make one sugar
Term
Three phases of Calvin Cycle?
1.
2.
3.
Definition
1. Carbon Fixation
2. Reduction
3. Regeneration of the CO2 acceptor (RuBP)
Term
Function and Location of the Dark Reactions
Definition
To Produce G3P
Stroma of chloroplast
Term
What is recycled from the Calvin Cycle
Definition
3 RuBP (Ribulose bisphosphate)
Term
How many CO2 molecules are used in Calvin?
How many at one time?
Definition
3 CO2
One at a time
Term
_CO2 from 1____ so, 6____ for 1_____
Definition
3 CO2 from 1G3P so, 6CO2 for Glucose
Term
Chemical formula for C3 carbon fixation
Definition
ATP + CO2 + NADPH =
NADP+ + ADP + Pi + G3P
Term
Photorespiration occurs wherever there is ___
Definition
Rubisco
Term
Chemical formula for Photorespiration
Definition
ATP + NADPH + O2 =
CO2 + NADP+ + ADP + Pi
Term
Why is photorespiration a problem for plants?
Definition
It is a waste of energy.
It wastes energy by not producing a cycle
Term
What conditions would encourage photorespiration to occur?
Definition
When low CO2 & high levels of O2 are around, Rubisco uses O2 to stick on Carbon atoms & it froms CO2 instead of G3P
Term
Stoma/Stromate
Definition
Holes in bottom of leaf that control levels of O2, H20, and CO2 allowed in cell. They enter by diffusion
Term
Guard Cells
Definition
Open and Close the Stromate/Stoma
Term
Problem with The Stomate in which the solution is to open to stomate
Definition
Photorespiration
Term
Problem with The Stomate in which the solution is to close to stomate
Definition
Dehydration
Term
What happens to the Stomate when the O2 builds up during Light Reactions?
Definition
Opens releasing O2 BUT H2O can escape too, dehydrating the plant
Term
What does closing the Stomate do?
Definition
Protection from dehydration to keep H2O vapor in
Term
Types of C4 Plants
Definition
Sugar cane, certain grasses
Term
Types of CAM plants
Definition
Cacti
Term
What is unique to C4 plants
What do they do?
Definition
Bundle-sheath cells
Store oxaloacetate
Term
What does the PEP carboxylate do?
Definition
"Escorts" CO2 to Rubisco & prevents O2 from getting to Rubisco
Term
The CAM Plants ___ do Calvin at Night
Definition
Cannot
Term
CAM plants ____ stomates at ____ when its ____, however ____ doesn't ______. They store CO2 in ______
Definition
CAM plants open stomates at night when its cool, however H2O doesn't evaporate. They store CO2 in malicacid
Term
CAM plants _____ stomates at ______ and use _____ to have ____ in order to do _____ _____
Definition
CAM plants close stomates during day and use malicacid to have CO2 in order to do Calvin Cycle
Term
Autotroph
Definition
Self Feeding
Term
Photoautotroph
Definition
Convert sunlight energy into ATP
Term
Heterotroph
Definition
Other feeding such as eating
Term
Eukaryotic chromosomes are _____ and ________ with proteins and ______ folded
Definition
Linear and Covered with proteins and Highly folded
Term
Prokaryotic chromosomes are _____ and ________ with proteins and ______ folded
Definition
Prokaryotic chromosomes are circular and don't have proteins and not highly folded
Term
Telomere
Definition
End of chromosome
Term
Centromere
Definition
Center circle thing of chromosome
Term
2 sister chromatids make up _____ chromosome(s)
Definition
One
Term
A chromosome with four arms is actually ___ chromosome(s)
Definition
One
Term
When bacteria have ______ chromosomes it is almost always a ______ thing. It ______ them to do things they couldn't before
Definition
Extra chromosomes it is almost always a good thing. It enables them to do things they couldn't before
Term
Bacteria process called _______
Definition
Conjugation
Fucking Boswell
Term
Plasmids
Definition
Extra chromosomes in bacteria
Term
Pilis
Definition
Bacteria arm that sticks to other bacteria
Term
Haploid= _ of each of chromosome
Diploid= _ of each of chromosome
Triploid= _ of each of chromosome
________= 4 of each of chromosome
Definition
Haploid= 1 of each of chromosome
Diploid= 2 of each of chromosome
Triploid= 3 of each of chromosome
Tetraloid= 4 of each of chromosome
Term
Chromosomes are usually found as ____
Definition
Pairs
Term
Homologous
Definition
Really similar/ Matching pair
Term
Gene
Definition
Set of instructions to build one protein
Term
Genome
Definition
All of your genes
Term
All chromosomes have ___ genes
Definition
Different
Term
______ & ______ only haploid cells in humans
Definition
Sperm & eggs only haploids
Term
Humans have _____ pairs chromosomes SO
Humans have _____ total chromosomes
Definition
23 pairs
46 total
Term
Haploid number in humans
Diploid number in humans
Definition
23 haploids
46 diploids
Term
Somatic cells
Definition
Everything that is not CELL? or egg
Diploid in humans
Term
Germ cells
Definition
Eggs & Sperm
Term
Karyotype
Definition
Picture with all of the chromosomes
Term
Sex Chromosomes
Definition
XY
Term
Autosomes
Definition
Everything besides sex chromosomes
Term
Polyploidy in plants
Definition
An extra chromosome in EVERY pair. Impossible in humans
Term
Trisomy
Definition
An extra chromosome in ONE pair
Term
Trisomy 21
Definition
Downs Syndrome, extra chromosome 21
Term
Aneuploidy
Definition
The wrong number of chromosomes
Term
Monosomy
Definition
A missing chromosome in ONE pair
Term
Klinefelters
Definition
2 Xs and a Y specific to boys. Trisomy
Term
Turners
1.
2.
3.
4.
Definition
Only monosomy that can survive.
2% survival rate.
Specific to girls.
Monsomy
Term
3 steps of Interphase with #4 being another path
1.
2.
3.
4.
Definition
G1
S
G2
G0
Term
What has to be done to produce identical cells
1.
2.
3.
Definition
Replication of DNA
Move the DNA copies away from each other
Divide the cytoplasm by producing a wall or membrane
Term
G1 Name and Define
Definition
Gap One
Where cells growing replicating organelles and taking in food
Term
S Name and Define
Definition
Synthesis Phase
Where DNA in replicated
Term
G2 Name and Define
Definition
Gap Two
Reproduce/Replicate Chromosomes
Term
G0 Name and Define
Definition
Gap 0
Cell does no divide
Term
Mitosis
Definition
Divide DNA and their chromosomes
Term
Interphase
I
Definition
Before meiosis begins, genetic material is duplicated.
Term
Anaphase
I
II
Definition
I Chiasmata break apart and sister chromatids begin migrating toward opposite poles.

II CHROMATIDS separate and begin moving to the poles.
Term
Telophase
I
II
Definition
I CLEAVAGE FURROW forms beginning the process of CYTOKINESIS (cell division). Resulting daughter cells are HAPLOID

II CLEAVAGE FURROW forms beginning CYTOKINESIS.
Term
Metaphase
I
II
Definition
I SPINDLE FIBERS attach to each dyad. Tension from spindle fibers aligns the tetrads at the cell equator.

II Tension from spindle fibers aligns chromosomes at the metaphase plate.
Term
Prophase
I
II
Definition
I Dyad pairs align to create "TETRADS", non-sister chromatids connect and trade sections at a "CHIASMA", a process called "CROSSING OVER".

II Spindle formation begins and centrosomes begin moving toward poles.
Term
Cytokinesis
Definition
When two complete daughter cells form.
Term
Synapsis
Definition
When the chromosomes stick together
Term
Dyad
Definition
Simple replicated chromosome
Chromosome with 2 sister chromatids
Term
Tetrad
Definition
2 Chromosomes stuck together
Pair of chromosomes
Term
Crossing-over
Definition
When the chromosomes trade pieces
Term
Law of independent assortment
Definition
Chromosomes line up independently within each pair. Random placement of chromosomes within a pair
Term
In meiosis, you start with ___ ______ cell and end with _____ ___-____ _____ cells
Definition
In meiosis, you start with one diploid cell and end with four non-identical haploid cells
Term
Spindle fibers
Definition
Groups of microtubules that move chromosomes during cell division
Term
Kinetochore
Definition
A specialized region on the centromere of chromosomes
Term
Cleavage furrow
Definition
Groove formed in cell membrane as the cell contractile ring tightens
Term
Cell plate
Definition
Disc like structure on equator of the spindle
Term
If a pair fails to disjoin in meiosis 2 it can lead to
Definition
Trisomies and monosomies
Term
Translocation
Definition
Crossing over between non-homologous chromosomes
Can cause down syndrome when chromosome 21 attaches to chromosome 14
Term
Inversion
Definition
Reverses or changes gene order
Can be harmless or can cause infertility or sterility
Term
Deletion
Definition
Segment missing
Small deletion on X chromosome can cause color-blindness
Term
Duplication
Definition
Extra section of chromosome
Can cause Huntington's disease and Fragile X syndrome
Term
Human chimera
Definition
When you and your twin fuse so some of your cells/ chromosomes can be the twins
Term
Cancer
Definition
Cells grow out of control
Term
Tumor supresor gene
Definition
If turned off, promotes cell division and cell growth
Term
Oncogene
Definition
If turned on too much, promotes cell division and cell growth
Term
Multiple hit hypothesis
Definition
Usually have to mutate more then one gene to cause cancer
Term
Proliferation
Definition
Growing & Dividing
Term
Pericentric inversions
Definition
When the chromsome inverses with changing the centromere
Term
Paracentric inversions
Definition
When a chromosome inverses without changing the centromere
Term
Haploid #
Definition
Total number of PAIRS
Term
Diploid #
Definition
diploid number is the total number of CHROMOSOMES
Term
Turners
Definition
Monosomy 23/Missing a sex chromosome
Term
Interphase
I
Definition
Before meiosis begins, genetic material is duplicated.
Term
Anaphase
I
II
Definition
I Chiasmata break apart and sister chromatids begin migrating toward opposite poles.

II CHROMATIDS separate and begin moving to the poles.
Term
Telophase
I
II
Definition
I CLEAVAGE FURROW forms beginning the process of CYTOKINESIS (cell division). Resulting daughter cells are HAPLOID

II CLEAVAGE FURROW forms beginning CYTOKINESIS.
Term
Metaphase
I
II
Definition
I SPINDLE FIBERS attach to each dyad. Tension from spindle fibers aligns the tetrads at the cell equator.

II Tension from spindle fibers aligns chromosomes at the metaphase plate.
Term
Prophase
I
II
Definition
I Dyad pairs align to create "TETRADS", non-sister chromatids connect and trade sections at a "CHIASMA", a process called "CROSSING OVER".

II Spindle formation begins and centrosomes begin moving toward poles.
Term
Cytokinesis
Definition
When two complete daughter cells form.
Term
Synapsis
Definition
When the chromosomes stick together
Term
Dyad
Definition
Simple replicated chromosome
Chromosome with 2 sister chromatids
Term
Tetrad
Definition
2 Chromosomes stuck together
Pair of chromosomes
Term
Crossing-over
Definition
When the chromosomes trade pieces
Term
Law of independent assortment
Definition
Chromosomes line up independently within each pair. Random placement of chromosomes within a pair
Term
In meiosis, you start with ___ ______ cell and end with _____ ___-____ _____ cells
Definition
In meiosis, you start with one diploid cell and end with four non-identical haploid cells
Term
Method of Dating Fossils
Definition
Relative Dating
Term
Fossilization is ____ so the ____ _____ is incomplete
Definition
Fossilization is rare, so the “fossil record” is incomplete. It does not give a fair account of what lived in the past,
Term
Comparitive Anatomy is in
1.
2.
3.
Definition
Homology and Analogy and Vestigial Structures
Term
Analogous Structures
Definition
Anatomically similar structures in unrelated species that look similar because perform same structure
Term
Vestigial Structures
Definition
Structures that over time become so small that they serve little purpose
Term
Lamarck believed in
Explain
Definition
Acquired Traits
“if an organism had a need for a variation, (for example, because it needed to change its feeding habits), then the variation would come about and the organism would develop new structures DURING ITS LIFETIME. The organism could then pass these acquired characteristics onto its offspring.
Term
Darwin believed in
Explain
Definition
Natural Selection
‘Those individuals with the variations for traits adaptive for their environment have a better chance of surviving and, thus, leave more offspring. Because variations can be inherited, many offspring will have those same traits. Organisms lacking those variations are less likely to survive and tend to leave fewer offspring. Over time, the population consists only of adapted organisms.’
Term
Gradualism
or
Gradualism Equilibrium
Definition
Selection and variation that happens more gradually
Change is slow, constant, and consistent
Occurs over a long time
Term
Punctuated Equilibrium
Definition
Change comes in spurts
Period of very little change
Any sudden change in a species and can also be the result of changes in the environment
Term
Founder Effect
Definition
The loss of genetic variation that occurs when a new population is established by a very small number of individuals from a larger population
Term
Genetic Drift
Definition
In each generation, some individuals may, just by chance, leave behind a few more descendents (and genes, of course!) than other individuals. The genes of the next generation will be the genes of the “lucky” individuals, not necessarily the healthier or “better” individuals. That, in a nutshell, is genetic drift. It happens to ALL populations—there’s no avoiding the vagaries of chance.
Term
Adaptations
Definition
Products of evolution by natural selection.
Variations which have been favorable and passed on
Term
Structural Adaptations
Definition
-physical features of an organism like the bill on a bird or the fur on a bear.
Term
Behavioral Adaptations
Definition
Things organisms do to survive

Bird migration
Marking territory
Mating dances
Term
Physiological or chemical Afdaptations
Definition
a bodily or cellular process, like the production of a protein or chemical that aides the organism somehow.

Enzymes needed for digestion,
Blood clotting factors
Ink of an Octopus
Venom of a snake
Term
Mimicry
Definition
Example
One butterfly which tastes delicious changes itself to look like the butterfly that tastes bad
Term
Speciation is
Definition
The development of a new species

Group of organisms that can interbreed and produce fertile offspring in nature
Term
Speciation Processes
1.
2.
Definition
1. Geographic Isolation of a small population from parent species
mountains, rivers, changing landscape (Glacier)

2. Reproductive Barriers
- timing (breeding seasons), behaviors, developmental issues
Term
Adaptive Radiation
Definition
Adaptive Radiation: divergent evolution and adaptation of a species over time in response to new environment
This is what happened with finches
Term
Convergent Evolution
Definition
Species that are not closely related evolve similar traits and share a similar environment
Ex. The shark is a fish
The Dolphin is a mammal
Term
Aristotle was
Definition
The first taxonomist
Divided organisms into plants & animals
Subdivided them by where they live
Term
Linnaeus was called "Father of Taxonomy" but what did he invent
Definition
Binomial Nomeclature
Term
_______ and species are the two names used to identify specific organisms in the binomial system of classification. ______ is used for plants.
Definition
Genus and species are the two names used to identify specific organisms in the binomial system of classification. Division is used for plants.
Term
Classification categories
1.
2.
3.
4.
5.
6.
7.
8.
Definition
Domain
Kingdom
Phylum
Class
Order
Family
Genus
Species
Dear King Phil, cool observant females = good sex
Term
Eukarya
Definition
are more complex and have a nucleus and membrane-bound organelles. Protists, fungi, plantae, animalia
Term
Prokarya
Definition
are unicellular prokaryotes (no nucleus or membrane-bound organelles)
Term
Archaea
Definition
Live in harsh environments, 1st cells to survive
Term
Eubacteria
Definition
May cause disease
Found in all environments besides harsh ones
Commercially important in making yogurt
Decomposers
Term
Evolution:
Definition
Evolution: all of the changes that have transformed life over an immense time
Term
Microevolution
Definition
A change in the “gene pool” of a population of organisms
A change in the relative frequency of alleles in a population of organisms
Evolution on a “small” scale
Term
Smallest group evolution can occur in
Definition
Population
Term
Gene pool:
Definition
Gene pool: the sum of all the individual genes in a given population of organisms
Where all of the variation is “stored”!
Term
What can cause the gene pool to change?
Definition
What can cause the gene pool to change?
Sexual recombination
Through a whole bunch of methods…
Mutations
Term
Hardy-Weinberg Equations
Definition
p + q =1

p^2 + 2pq + q^2 = 1
Term
Evidence for Evolution; Fossil Record
Definition
Evidence based on fossils found
Based on time they lived and bones
Term
Evidence for Evolution; Geographic Distribution
Definition
Basically survival of the fittest ish
Term
Evidence for Evolution; Similarities in Structure
1.
2.
Definition
Homologous Structures -Similar bones in all the same pattern and arrangement, different functions
Vestigial Structure
Term
Evidence for Evolution; Similarities in Development
Definition
Similarities in the Embryos of things developing
Term
Evidence for Evolution; Molecular Biology
Definition
DNA stuff
Term
Radial Symmetry
Definition
Symmetry with spokes coming out of the middle like a big wheel or starfish
Term
When writing binomial nomenclature you:
Definition
Italics
First uppercase
Second lowercase
Term
Eukaryotic chromosomes are _____ and ________ with proteins and ______ folded
Definition
Linear and Covered with proteins and Highly folded
Term
Prokaryotic chromosomes are _____ and ________ with proteins and ______ folded
Definition
Prokaryotic chromosomes are circular and don't have proteins and not highly folded
Term
Telomere
Definition
End of chromosome
Term
Centromere
Definition
Center circle thing of chromosome
Term
2 sister chromatids make up _____ chromosome(s)
Definition
One
Term
A chromosome with four arms is actually ___ chromosome(s)
Definition
One
Term
When bacteria have ______ chromosomes it is almost always a ______ thing. It ______ them to do things they couldn't before
Definition
Extra chromosomes it is almost always a good thing. It enables them to do things they couldn't before
Term
Bacteria process called _______
Definition
Conjugation
Fucking Boswell
Term
Plasmids
Definition
Extra chromosomes in bacteria
Term
Pilis
Definition
Bacteria arm that sticks to other bacteria
Term
Haploid= _ of each of chromosome
Diploid= _ of each of chromosome
Triploid= _ of each of chromosome
________= 4 of each of chromosome
Definition
Haploid= 1 of each of chromosome
Diploid= 2 of each of chromosome
Triploid= 3 of each of chromosome
Tetraloid= 4 of each of chromosome
Term
Chromosomes are usually found as ____
Definition
Pairs
Term
Homologous
Definition
Really similar/ Matching pair
Term
Gene
Definition
Set of instructions to build one protein
Term
Genome
Definition
All of your genes
Term
All chromosomes have ___ genes
Definition
Different
Term
______ & ______ only haploid cells in humans
Definition
Sperm & eggs only haploids
Term
Humans have _____ pairs chromosomes SO
Humans have _____ total chromosomes
Definition
23 pairs
46 total
Term
Haploid number in humans
Diploid number in humans
Definition
23 haploids
46 diploids
Term
Somatic cells
Definition
Everything that is not CELL? or egg
Diploid in humans
Term
Germ cells
Definition
Eggs & Sperm
Term
Karyotype
Definition
Picture with all of the chromosomes
Term
Sex Chromosomes
Definition
XY
Term
Autosomes
Definition
Everything besides sex chromosomes
Term
Polyploidy in plants
Definition
An extra chromosome in EVERY pair. Impossible in humans
Term
Trisomy
Definition
An extra chromosome in ONE pair
Term
Trisomy 21
Definition
Downs Syndrome, extra chromosome 21
Term
Aneuploidy
Definition
The wrong number of chromosomes
Term
Monosomy
Definition
A missing chromosome in ONE pair
Term
Klinefelters
Definition
2 Xs and a Y specific to boys. Trisomy
Term
Turners
1.
2.
3.
4.
Definition
Only monosomy that can survive.
2% survival rate.
Specific to girls.
Monsomy
Term
3 steps of Interphase with #4 being another path
1.
2.
3.
4.
Definition
G1
S
G2
G0
Term
What has to be done to produce identical cells
1.
2.
3.
Definition
Replication of DNA
Move the DNA copies away from each other
Divide the cytoplasm by producing a wall or membrane
Term
G1 Name and Define
Definition
Gap One
Where cells growing replicating organelles and taking in food
Term
S Name and Define
Definition
Synthesis Phase
Where DNA in replicated
Term
G2 Name and Define
Definition
Gap Two
Reproduce/Replicate Chromosomes
Term
G0 Name and Define
Definition
Gap 0
Cell does no divide
Term
Mitosis
Definition
Divide DNA and their chromosomes
Term
Glycolysis is the _____ phase of ____ _____
Definition
1st phase of aerobic respiration
Term
Define Glycolysis
Definition
Process that partially breaks down glucose and harvests some of its energy
Term
Where does Glycolysis occur
Definition
Cytoplasm
Term
What organisms does Glycolysis take place in?
Definition
All organisms
Term
Beginning equation of Glycolysis
Net gain of ATP in Glycolysis
Resulting equation of Glycolysis
Definition
Glucose + 2 ATP + 2 NAD+ + 4 ADP + 4Pi
Net gain of 2 ATP
2 pyruvates + 2 ADP + 2Pi + 4 ATP + 2NADH
Term
Step 1 of Glycolysis is called
And define
Definition
Energy investment step
ATPs provide enough energy for whole reaction
Term
Why would delta G be negative in Glycolysis?
Why positive?
Definition
Negative if ATP is broken down
Positive if ATP is built, besides when 1,3 -Bisphosphoglycerate because it is unstable
Term
Kinase
Definition
Moves phosphate group
Term
Isomerase/Multase
Definition
Same atoms rearranged
Term
G3P
Definition
Glyceraldehyde 3-phosphate
Term
PEP
Definition
Phosphoenolpyruvate
Term
DHAP
Definition
Dihydroxyacetone phosphate
Term
After glucose and before pyruvate in Glycolysis everything is considered an ______
Definition
intermediate
Term
Three irreversible Reactions
1.
3.
10.
why random numbers?
what do they all have in common
Definition
1. hexokinase
3. phosphofructokinase
10. pyruvate kinase
numbers are what step
very negative delta G
Term
Why are the three irreversible Glycolysis reactions irreversible
Definition
Because them backwards would have a very high delta G
Term
PEP definition
Definition
Inhibitor for the 3rd step. Feed back inhibition
Term
ADP- Hard to say what the three are
1. _____ signals
2. _____ of this = ______ of ______
3. Activator of ________
Definition
1. Hunger
2. Alot of this = a lot of ATP
3. phosphofructokinase
Term
Aresenate
What does it affect?
What does that ^ cause?
Definition
Affects GAP dehydrogenase
Prevents Phosphate from being added to sugar
Term
Iodoacetate
What does it affect?
What does that ^ cause?
Definition
Affects GAP dehydrogenase
Covalently binds to active site of enzyme
Term
Fluoride ion
What does it affect?
What does that ^ cause?
Definition
Affects Enolase
Sticks to Mg+2 ion at active site and blocks substrate from entering
Term
Where does fermentation take place
Definition
Cytoplasm
Term
Fermentation Reaction
and why
Definition
Reaction to recycle NADH to NAD+ in the absence of oxygen
So you can still do glycolosis
Term
Three steps of Aerobic Respiration
1.
2. Two parts technically
3.
Definition
1. Glycolosis
2. Link/Transition Phase & Citric Acid/Krebs Cycle
3. Oxidative Phosphorylation
Term
Reactants of Link/Transition Phase
1.
2.
3.
Definition
Pyruvate
NAD+
Coenzyme A
Term
Products of Link/Transition Phase
1.
2.
3.
Definition
CO2
Acetyl CoA
NADH
Term
Reactants of Krebs Cycle
1.
2.
3.
4.
And what to remember about them
Definition
Acetyl CoA
3NAD+
ADP + P
FAD
Since Glycolosis produces two pyruvates, they are technically doubled
Term
Products of of Krebs Cycle
1.
2.
3.
4.
5.
And what to remember about them
and where is energy stored?
Definition
2 CO2
ATP- I think Energy Stored
3 NADH-Energy Stored
FADH2-Energy Stored
Coenzyme A
Since Glycolosis produces two pyruvates, they are technically doubled
Term
4 Carbon molecule, last molecule in Krebs cycle before it repeats
Definition
Oxaloacetate
Term
6 Carbon molecule, first molecule of Krebs cycle after CO2+CoA
Definition
CItrate
Term
Isomer of Citrate
Definition
Isocitrate
Term
What is a pyruvate?
Definition
Three carbon molecule
Term
Kinetic Energy
Definition
Energy or motion
Term
Potential Energy
Definition
Stored Energy
Term
Concentration gradient potential energy
Used in?
Definition
(Used in Secondary Active Transport) Energy due to concentration gradient
Term
Chemical energy
Where is energy stored?
What two groups of bonds?
Definition
Carbon-Carbon bonds
High energy phosphate-phosphate bonds
Energy stored in bonds
Term
Photosynthesis chemical formula
Definition
Sun energy + 6H20 + 6 CO2 = C6H12O6 + 6O2 (Chemical energy)
Term
Respiration chemical formula
Definition
C6H12O6 + 6O2 = 6H20 + 6 CO2 + Chemical Energy (in form of ATP)
Term
Anabolic Reactions
Two Examples
Define
Definition
Photosynthesis, Condensation
Builds something up & Requires energy
Term
Catabolic Reactions
Two Examples
Define
Definition
Respiration, Hydrolysis
Break something down & Releases Energy
Term
First Law of Thermodynamics
Definition
Law of Conservation of Energy
Term
Second Law of Thermodynamics
Definition
Free energy is the energy available to do work
Always decreasing
Term
Entropy
Definition
Measure of disorder. Always increasing in a closed system
Term
Transition State
Definition
Change from stable to unstable for a change to occur
Term
Activation Energy
Definition
Energy required to get the reactants into an unstable transition state
Term
ATP macromolecule category & Type
Definition
Nucleic Acid
RNA Nucleotide
Term
Substrate Level Phosphorylation
Definition
Take phosphate off ATP & put onto something else to give it energy
Term
Coupled Reaction
Definition
Energy is transferred from one side of the reaction to the other.
Term
Extra hydrogens equals ____ _____
Definition
Extra Electrons
Term
Another type of electron carrier besides NAD+
Definition
FADH2
Term
Allosteric Site
Definition
The place on an enzyme where a molecule that is not a substrate may bind, thus changing the shape of the enzyme and influencing its ability to be active.
Term
Irreversible Inhibitors
Definition
Permanently destroys enzyme, not common in cells
Term
Activators
Definition
Molecules that bond to allosteric sites and support the binding of the substrate at the active site
Term
H2O2 + Sand rate= Enzyme?
Definition
0 No
Term
H202+MnO2 rate =Enzyme?
Definition
3 YEs
Term
Liver + H202 rate = Enzyme?
Definition
2 Yes
Term
Potato+ H202 rate = Enzyme?
Definition
1 No
Term
Liver enzyme is reusable ?
Definition
No
Term
H02 reusable ?
Definition
Yes
Term
Crushed Liver Rate High or Low?
Definition
High
Term
Uncrushed Liver Rate High or Low?
Definition
High
Term
Crushed Potato Rate High or Low?
Definition
High
Term
Uncrushed Potato Rate High or Low?
Definition
Moderate/Low
Term
Why does crushed = Higher rate?
Definition
More room for molecules to reach enzymes?
Term
More Particles = ____ rate
Definition
Higher
Term
Liver + H202(boiled) Rate? Why?
Definition
Rate:1 Almost no activity
Ice & Heat denature enzymes
Term
Liver + H202(Ice Water) Rate? Why?
Definition
Rate: 2 Moderate gas production
Ice & Heat denature enzymes
Term
Liver + H202( 27o C water) Rate? Why?
Definition
Rate: 3 Rapid gas production
Ice & Heat denature enzymes, so room temperature is good for enzymes
Term
Liver + H202 + Water Rate? Why?
pH?
Definition
Rate: 4
pH: 7
Enzymes work better at neutral or basic pH
Term
Liver + H202 + HCl Rate? Why?
pH?
Definition
Rate: 1
pH: 1
The low pH denatured the enzyme
Term
Liver + H202 + NaOH Rate? Why?
pH?
Definition
Rate: 3
pH: 12
Enzymes work better at neutral or basic pH
Term
What gas made the match "pop"
Definition
H2 gas should have made the pop sound
Term
What gas caused the to splint relight
Definition
The O2 gas made splint relight
Term
What was the remaining liquid in crazy experiment
Definition
Probably H20
Term
Test G, Crazy one haha rate?
Definition
Really fast, 4
Term
Catalyst
Definition
A substance that increases the rate of a chemical reaction without itself undergoing any permanent chemical change.
Term
Difference between catalyst and enzyme
Definition
An inorganic catalyst requires very high temperature to impart an effect
An enzyme lowers activation energy and works mostly at room temperature.
Not all catalysts are enzymes, because all enzymes are proteins whereas not all catalysts are proteins.
All enzymes are catalysts.
Term
Enzyme catalase change hydrogen peroxide into non-poisonous solution?
If so, what solutions?
Definition
Yes, to water and oxygen
Term
Cell Size
Definition
Very small. Surface Area to Volume Rule
Term
Surface Area to Volume Rule
Definition

Cells maximize the SA:V ratio so they can efficiently transport materials in & out

Higher SA & Lower V=Easier to move things in and out

Term
Cell Theory
1.
2.
3.
Definition
General Idea accepted to be true based on evidence
All living things are made of cells
Cells are the basic of structure and function in organisms
All cells come from pre-existing cells
Term
Example of Prokaryotic Cells
Definition
Archea & Bacteria
Term
Example of Eukarotic Cells
Definition
Eukarya
Term
Components all Cells have
1.
2.
3.
Definition
Cell membrane/ Plasma membrane
Ribosomes
DNA
Term
Prokaryotic Cells
Nucleus?
Nuceoid Region?
Membrane bound organelles?
Single Celled?
Definition
No nucleus
Have "nucleoid region"
No membrane bound organelles
Single Celled
Term
Eukaryotic Cells
Nucleus?
Nuceoid Region?
Membrane bound organelles?
Single Celled?
Definition
Nucleus
Membrane bound organelles
Single cell or multicellular
Canalsobe??
Term
Cytoskeleton Define then say what it does
1.
2.
3.
All made up of _____
Definition
Hold up shape of cell
Microfiloments
Intermediate Filaments
Microtubules
Proteins
Term
Microfiloments, Intermediate Filaments, Microtubules
Definition
Act as anchors for organelles
Give structure to cells
Help cells move
Term
Microtubules
Made up of?
Form?
Help?
Definition
Tubulin Protein
Tracks that organelles can move along
chromosomes move during cell division
Term
Spindle
Definition
Pulls DNA from middle to two sides
Term
Flagella- 3 things
Definition
Tail
Help cells move
Can helps move other things for them
Term
Cilia- 3 things
Definition
Tiny hair
Help cells move
Can helps move other things for them
Term
Diffusion
Definition
Movement of molecules from area of high concentration to low concentration
Term
Passive Transport
Definition
Transport or movement of molecules that does not need energy.
Term
Concentration Gradient
Definition
Measurement of how concentration of something changes from one place to another.
When there is a difference
Can't be at equilibrium
State
Term
Equilibrium
Definition
State where there is no net movement
Term
Diffusion is affected by:
1
2
3
Definition
Temperature
Size of molecules
The steepness of concentration gradient
Term
Osmosis
Definition
Diffusion of water ONLY across a membrane
Term
Low Solute= ____ Water
High Solute= ____ Water
Definition
Low Solute= High Water
HIgh Solute= Low Water
Term
Hypertonic
Higher or Lower?
Definition
When solutions have unequal SOLUTE concentrations
The higher SOLUTE concentration
Term
Hypotonic
Definition
When solutions have unequal SOLUTE concentrations
The lower SOLUTE concentration
Term
Isotonic
Definition
If solute concentrations are equal
Term
Contractile Vacuole
Definition
Serves as a protective mechanism that prevents the cell from absorbing too much water and possibly exploding.
Term
Plasmolysis
Definition
Plasmolysis is the process in plant cells where the plasma membrane pulls away from the cell wall due to the loss of water through osmosis.
Term
Turgid
Turgor Pressure
Definition
Turgor Pressure is the main pressure of the cell contents against the cell wall in plant cells and bacteria cells, determined by the water content of the vacuole, resulting from osmotic pressure
Term
Cytolysis
Definition
When cells burst from too much water
Term
Saline
Definition
Same SOLUTE concentration as that of blood
Term
Aquaporin
Definition
Channel for water travel
Term
Double Membrane Organelles
1.
2.
3.
What's special about them?
Definition
Nucleus
Chloroplast
Mitochondria
They all have their own DNA
Term
Nucleus
Definition
Control Center for the Cell that holds the DNA code in the form of chromatin or chromosomes
Term
How many chromosomes do human's have
What is the one that makes males, male?
Definition
23
XY
Term
Nucleolus
Definition
Where the ribosome RNAs are made
Term
Chloroplast
Found in?
Collects?
Makes?
Definition
Found only in Protists and Plants
Far better at collecting solar energy than any solar cell that humans have invented so far
Makes Glucose using the Sun’s energy
Term
Stroma
Definition
The connective, functionally supportive framework of a biological cell, tissue, or organ
Term
Granum
Definition
Stack of "coins" in chloroplast
Term
Inter-membrane Space
Definition
Region between the inner membrane and the outer membrane of a mitochondrion or a chloroplast
Term
Thylakoid
Definition
One "coin" in chloroplast
Term
Mitochondria
Definition
Power Plant of the cell
Term
Listernae
Definition
Folds inside mitochondria
Term
Matrix
Lumen
Definition
Inside
Term
Mitochondrion brakes down parts of _____ to make _____
Definition
sugars to make ATP
Term
ATP
Definition
Adenosine Triphosphate
Term
Endosymbiotic Theory
Definition
Theory of how eukaryotes arose from prokaryotes
(When the cells like ate the other ones)
Term
Membrane infolding
Definition
When a cell membrane closes on itself making a bubble
Term
Single membrane organelles
Definition
Endomembrane/Cytomembrane System
Similar environments to outside cell
Term
Rough ER Has? Along the?
Builds?
Modifies?
Folds Called?
Definition
Has ribosomes. Along the cytosolic side of membrane
Membrane
Proteins made by ribosomes
Cisternae
Term
Smooth ER Makes _____ and ______ Stores? Breaks down? Detoxifies?
Definition

Does not have ribosomes

Makes Lipids and hormones

Stores Calcium Ions

Toxins Alcohol

Term
Golgi/Golgi bodies
Organizes the _____ and _____ that come from the ___
_____/______s them if needed
_____ them to their destination in _______
Definition
Organizes proteins and lipids that come to it from the ER’s
Modifies/Labels them if needed
Sends them on their way to their destination in vesicles!
Term
Vesicles
Definition
Small membrane “bubbles” that carry materials to their destination.
Term
Lysosomes
Definition
Garbage Compactor
Term
Vacuoles
Definition
Small vacuoles store food in plant and animal cells
Plants have a large permanent central vacuole that stores water and ions
Term
Only ______ have large central vacuoles that store water and other nutrients
Definition
Only plants have large central vacuoles that store water and other nutrients
Term
Secretory Protein's Path
1.
2.
3.
4.
5.
6.
7.
Definition
Info from DNA-
Info in RNA-
Ribsomes make protein
Rough ER modifies proteins
Smooth ER sends protein in vesicle to
Golgi body
Sends vesicle to destination
Term
Found only in plant cells
1
2
3
Definition
Cell Walls
Chlorplasts
Central Vacuole
Term
Found only in animal cells
1.
Define the abbreviated word
Definition
Centriole/Centrosome/MTOC-microtubule organizing center
Term
Leeuwenhook
Definition
Made 1st hand held microscope
Term
Hooke
Definition
Coined the term cells. Made an improved microscope
Term
Brown
Definition
Discovered Nucleus
Term
Schleiden
Definition
Hypothesized that plant cells were independent subunits of the whole plant
Term
Schwann
Definition
Stated both animals and plants are made up of cells
Term
Virchow
Definition
Cells only arise from pre-existing cells
Term
Plasmodesmata
Definition
Channels in the primary cell in which the cell wall of plants interconnect cell cytoplasm so substances can flow uninterrupted
Term
Tight Junctions
Definition
Link animal epithelial cells lining body cavities and organs to stop fluid from passing between cells
Term
Adhering Junctions
Definition
Join cells into tissues in locations where they need such as skin and heart
Term
Gap Junctions
Definition
Link to cytoplasm of neighboring cells similar to plamodesmata in plants
Term
Endocytosis
Definition
Cell brings in material from the outside into a vesicle that separates from the cell membrane
Term
Phagocytosis
Definition
Cell eating
Term
Pinocytosis
Definition
Cell drinking
Term
Receptor-mediated endocytosis
Definition
Uses receptor to identify the foods it wants to eat
Term
Phagocyte
Definition
Cell that does a lot of eating
Term
Exocytosis
Definition
Cell expels unwanted material from a vesicle that fuses with cell membrane
Term
Facilitated Diffusion
Definition
Diffusion that only occurs when there is a helper protein
Term
Ion channel
Definition
Channels that molecules move through with no "door"
Term
Channel proteins*****
Definition
Provide passageways through the plasma membrane for certain molecules
Term
Active transport
Definition
Facilitated diffusion in opposite direction. Needs energy
Term
Transporter Protein
Definition
A type of protein that actively transports materials across a cell membrane that would not otherwise allow this to occur.
Term
Uniport
Definition
Carrier that moves only one protein
Term
Symport
Definition
Carrier that carries two different things protein
Term
Antiport
Definition
Carrier that moves two things in opposite directions
Term
Sodium potassium pump
Define
Definition
An active transport mechanism
Term
_____ ______ molecules travel easily through membrane
Definition
Small nonpolar
Term
Passive Transport
Types:1.
2.
3.
Direction
___ Concentration Gradient
Definition
Facilitated Diffusion
Osmosis
Diffusion
High----Low
Down concentration gradient
Term
Active Transport
Requires?
Type
Direction
___ Concentration Gradient
Definition
ATP
Active Transport
Low----High
Up concentration gradient
Term
Secondary Active Transport
Depends on ____ ______ that is already ____ _____
Definition
Depends on Active Transport that is already using ATP
Term
Lipids with saturated fatty acids makes membrane _____ ______. Causing ____ to flow______
Definition
Lipids with saturated fatty acids makes membrane less fluid. Causing things to flow less
Term
Lipids with unsaturated fatty acids makes membrane ____ ______. Causing ____ to flow____
Definition
Lipids with unsaturated fatty acids makes membrane more fluid. Causing things to flow more
Term
Lipid Rafts
Define
Makes membrane ______ ______
Definition
When sphingolipids stick together.
Makes membrane less fluid
Term
Membrane Cholesterol
Definition
Reduce fluidity at normal temperatures
Term
Peripheral Proteins
Location/Define
Example
Definition
Stuck to the surface of the membrane
Cell signaling proteins
Term
Integral membrane Proteins
Location/Define
Example
Definition
Proteins that have some hydrophobic amino acids and are at least partway into the membrane layer
Some Signaling molecules
Term
Transmembrane Proteins
Location/Define
Examples
Definition
Integral proteins that pass all the way through.
Transport proteins, channels
Term
Amino Acids near the HEADS of LIPIDS tend to be ________
Definition
Hydrophilic
Term
Amino Acids near the TAILS of LIPIDS tend to be ________
Definition
Hydrophobic
Term
Glycolipids
Define
Used for ____ _____
Definition
Sugar attached to lipid
Used for identification purposes
Term
Glycoproteins
Define
Used for ____ _____
Definition
Sugar attached to protein
Used for identification purposes
Term
What bond holds the two carbon atomis in C2H4?
Definition
Double Covalent bond
Term
What molecule is produced in a condensation reaction
Definition
Polymer and water
Term
The breaking of these bonds is the first thing that happens when water is heated
Definition
Hydrogen bonds
Term
Liquid effective in dissolving polar substances
Definition
Water
Term
Kind of compounds are substances produced and found in living things
Definition
Hydrocarbons
Term
Reaction that breaks polymers into monomers
Definition
Hydrolysis
Term
Carbohydrate monomer
Definition
Monosacchride
Term
An example of structural isomers
Definition
Glucose & Fructose
Term
Polysaccharide stored in muscle and liver cells
Definition
Glycogen
Term
Bond between two amino acids
Definition
Polypeptide
Term
Main difference between two amino acids
Definition
R Groups
Term
Two types of secondary structure in proteins
Definition
Alpha helix, beta sheet
Term
4 intermolecular forces that hold quaternary structures together
Definition
Hydrogen bond, hydrophobic interaction, salt bridge, disulfide bridge
Term
Type of molecule with polar and non-polar regions
Definition
Phospholipids
Term
Difference between intermolecular and intermolecular
Definition
22. intramolecular = bonds within a molecule (ionic, covalent, etc…); intermolecular = bonds between separate molecules or atoms far away in the same molecule
Term
Difference between triglyceride and phospholipid?
Definition
3 fatty acids + 1 glycerol = 1 triglyceride; 2 fatty acids + 1 glycerol + 1 phosphate group (+ R) = phospholipid
Term
Reaction by which amino acids are joined together?
Definition
Condensation
Term
Molecules produced when cellulose is hydrolyzed
Definition
glucose molecules
Term
What way do two ends of RNA molecules differ from each other
Definition
One end is the N terminus and has an amine group; the other end is the C terminus and has a carboxylic acid group
Term
Identifying structural formula steroid
Definition
4 Ringed Structure
Term
Adhesion
Definition
When water molecules stick to other surfaces
Term
Cohesion
Definition
When water sticks to itself
Term
Surface Tension
Definition
Tightness of hydrogen bonds on the surface of water
Term
Capillary Action
Definition
Water's ability to rise up through small tubes
Term
Functional Groups
Definition
Attachments that affect the functions of hydrocarbons
Term
OH at the end of a molecule
Definition
Alcohol
Term
Double bonded OC in molecule
Definition
Carbonyl
Term
C-C--O
Definition
Aldehyde
Term
C-C(--O)-C
Definition
Ketone
Term
C-O-H
Definition
Carboxyl
Term
N-H-H
Definition
Amino
Term
S-H
Definition
Sulfhydryl
Term
Starch
Definition
Polysaccharide that stores energy
Term
Cellulose
Definition
What makes up plant cell walls
Term
Glycogen
Definition
Body makes glycogen and it is stored in muscles. Animals version of starch
Term
Chitin
Definition
Polysaccharide found in exoskeleton of insects
Term
Lipids
Definition
Hydrophobic
Term
Fats & Oils
Definition
Store energy and keeps animals warm
Term
A bend lipid
Definition
Unsaturated
Term
Phospholipids
Definition
Part of cell membrane. Triglyceride with phosphate group
Term
Phospholipids
Definition
Part of cell membrane. Triglyceride with phosphate group
Term
Bilayer
Definition
Bubble around water, 2 part membrane
Term
Carotenoids
Definition
Help plants collect light energy
Term
Steroids/Hormones
Definition
Regulate bodily functions. Four rings structure
Term
Fluidity
Definition
Rate at which phospholipids are made
Term
Vitamin
Definition
Electron carriers
Term
Water
Definition
Repels water on skin/feathers
Term
Nucleic Acids
Definition
DNA, RNA carry genetic info that tells cells how to make proteins
Term
Monomer Nucleic Acid
Definition
Nucleotide
Term
RNA Nucleotide
Definition
Copy of an instruction DNA
Term
Base + Sugar
Definition
Nucleoside
Term
Base + Sugar + Phosphate
Definition
Nucleotide
Term
Polymer
Definition
Nucleic Acid
Term
Nucleic Acid Bonds
Definition
Phosphodiester Bond
Term
Difference Between DNA and RNA
Definition
DNA RNA
Double Stranded Single Stranded
AT & CG AV & CG
Term
Proteins
Definition
Cellular machines, engines, & buildings
Term
Monomer of a protein
Definition
Amino Acid
Term
Cysteine
Definition
Forms disulfide bridges
Term
Hemoglobin
Definition
Protein present in red blood cells. Carries oxygen
Term
Bond between two two disaccharides
Definition
Glycosidic Bonds
Term
Independent Variables
Dependent Variables
Definition
What you change between control & experimental group
The thing you are counting
Term
Control Group
Experimental Group
Definition
The group in which you know what will happen
The group in which you don't know what will happen
Term
Constant Variable
Definition
Something that has to stay the same
Term
Characteristics of Life
Definition
Cells, Organization, Energy, Growth, Development, Reproduction, Display Heredity, Maintain Homeostasis, Response to environment, Evolve & Adapt
Term
Biosphere
Definition
All living organisms and their environments
Term
Biome
Definition
Different ecosystems
Term
Ecosystem
Definition
All biotic and abiotic factors within a specimen
Term
Organelle
Definition
Compartments made up of macro molecules
Term
Biological macromolecule
Definition
Carbs, proteins, lipids, nucleic
Term
CH4
Definition
Methane
Term
C2H6
Definition
Ethane
Term
C3H8
Definition
Propane
Term
C4H10
Definition
Butane
Term
Pentane
Definition
C5H12
Term
C3H6O3
Definition
Glycerol
Term
Aldehyde
Definition
Organic molecules containing a carbonyl group at beginning or end
Term
Acetone
Definition
Simplest Ketone
CH3COCH3
Term
Early scientists thought ______ was the cell’s hereditary material because it was more ______ than DNA
Definition
Early scientists thought protein was the cell’s hereditary material because it was more complex than DNA
Term
Fred Griffith
Definition
Study suggested that DNA was probably the genetic material
Term
Chromosomes are made of both ______ and _____
Definition
Chromosomes are made of both DNA and protein
Term
Hershey & Chase
Definition
Proved that DNA was the cell’s genetic material
Term
Erwin Chargaff
Definition
Showed the amounts of the four bases on DNA ( A,T,C,G)
Term
_______ must pair with Thymine
Guanine must pair with _______
Definition
Adenine must pair with Thymine
Guanine must pair with Cytosine
Term
AT CG form what kind of bonds
Definition
Weak hydrogen bonds
Term
Rosalind Franklin
Definition
Took diffraction x-ray photographs of DNA crystals
Term
Watson & Crick
Definition
Built the first model of DNA using Franklin’s x-rays
Term
Two strands of DNA coiled called a
Definition
Double Helix
Term
Sides of DNA made of
Also known as
Definition
Deoxyribose bonded to phosphate (PO4)
Legs of Ladder
Term
Center of DNA made up
Also know as
Definition
Nitrogen bases bonded together by weak hydrogen bonds
Rungs of Ladder
Term
Most DNA has a ____-hand twist with ____ base pairs in a complete turn
Definition
Right hand twist
10 base pairs in completer turn
Term
Hot spots occur where right and left twisted DNA meet producing ______
Definition
Mutations
Term
Left twisted DNA is called Z-DNA or _____ DNA
Definition
southpaw
Term
DNA is made up of
Definition
Nucleotides
Term
Nucleotides (Make up DNA) made up of
1.
2.
3.
Definition
1.Phosphate group
2.5-carbon sugar
3.Nitrogenous base
Term
How are Carbons numbered?
Definition
Clockwise from 1' to 5'
Term
DNA are known as Antiparallel Strands because if one strand goes from 5' to 3' the other is ______ in direction and goes from ____ to _____
Definition
Opposite in direction gores from 3' to 5'
Term
How do you tell if the Bases are Purines?
Which are the Purine bases?
Definition
Double Ring
Adenine (A)
Guanine (G)
Term
How do you tell if the Bases are Pyrimidines?
Which are the Pyrimidines bases?
Definition
Single Ring
Thymine (T)
Cytosine (C)
Term
Purines only pair with ______
Definition
Pyrimidines
Term
______ (#) hydrogen bonds required to bond Guanine & Cytosine
Definition
3
Term
______ (#) hydrogen bonds are required to bond Adenine & Thymine
Definition
2
Term
DNA has to be ______ before a cell divides
Definition
Copied
Term
DNA is copied during the ____ or _______ phase of _________
Definition
DNA is copied during the S or synthesis phase of interphase
Term
Where does Synthesis take place?
Definition
Nucleus of eukaryotes
Term
DNA replication begins at _____ ___ _______
Definition
Begins at Origins of Replication
Term
Two strands open forming Replication _____
What happens here?
Definition
Two strands open forming Replication Forks
New strands grow at the forks
Term
As the 2 DNA strands open at the origin, _______ Bubbles form.
Prokaryotes (bacteria) have _______ bubble(s)
Eukaryotic chromosomes have ______ bubble(s)
Definition
Replication Bubbles
Prokaryotes (bacteria) have a single bubble
Eukaryotic chromosomes have MANY bubbles
Term
Enzyme ____ ________ unwinds and separates the 2 DNA strands by breaking the weak hydrogen bonds
Definition
DNA Helicase
Term
Single-Strand Binding Proteins attach and keep the 2 DNA strands _______ and ______
Definition
Separated and untwisted
Term
Topoisomerase
Not really important
Definition
Relieves stress on DNA as it separates
Term
Before new DNA strands can form, there must be____ _______ present to start the addition of new nucleotides
Definition
RNA primers
Term
_______ is the enzyme that synthesizes the RNA Primer
Definition
Primase
Term
DNA polymerase can then add the new ________
Definition
Nucleotides
Term
DNA polymerase can only add nucleotides to the _____ end of the DNA
This causes the NEW strand to be built in a ___ to ____ direction
Definition
3'

This causes the NEW strand to be built in a 5’ to 3’ direction
Term
The ______ _____ is synthesized as a single strand from the point of origin toward the opening replication fork
Definition
Leading Strand
Term
The ______ _____ is synthesized discontinuously against overall direction of replication
Definition
Lagging Strand
Term
This strand is made in MANY short segments It is replicated from the replication fork toward the origin
Definition
Lagging Strand
Term
________ ________ - series of short segments on the lagging strand
Definition
Okazaki Fragments
Term
Okazaki Fragments must be joined together by __ _______ called ______
Definition
An enzyme called Ligase
Term
DNA polymerase initially makes about 1 in _______ base pairing errors
______ proofread and correct these mistakes
The new error rate for DNA that has been proofread is 1 in ___ ______ base pairing errors
Definition
10,000

Enzymes proofread and correct these mistakes

The new error rate for DNA that has been proofread is 1 in 1 billion base pairing errors
Term
Meselson & Stahl
Definition
New DNA consists of 1 PARENTAL (original) and 1 NEW strand of DNA
Term
DNA contains _____, sequences of nucleotide bases
Definition
Genes
Term
These Genes code for _______ or ____
Definition
Polypeptides or proteins
Term
_____ are used to build cells and do much of the work inside cells
Definition
Proteins are used to build cells and do much of the work inside cells
Term
Proteins are made of _____ ______ linked together by peptide bonds
__(#) different ____ ____ exist
Definition
Proteins are made of amino acids linked together by peptide bonds
20 different amino acids exist
Term
Amino acid chains are called ________
Definition
Amino acid chains are called polypeptides
Term
DNA is found inside the ______
Proteins, however, are made in the _______ of cells by organelles called _____
Definition
DNA is found inside the nucleus
Proteins, however, are made in the cytoplasm of cells by organelles called ribosomes
Term
DNA ‘s code must be copied and taken to the ______
In the cytoplasm, this code must be read so _____ ____ can be assembled to make polypeptides (proteins)
This process is called _____ _____
Definition
DNA ‘s code must be copied and taken to the cytosol
In the cytoplasm, this code must be read so amino acids can be assembled to make polypeptides (proteins)
This process is called PROTEIN SYNTHESIS
Term
____ contains the base uracil (U)
____ has thymine (T)
____ molecule is single-stranded
____ is double-stranded
Definition
RNA contains the base uracil (U)
DNA has thymine (T)
RNA molecule is single-stranded
DNA is double-stranded
Term
_______ ____ (_RNA) copies DNA’s code & carries the genetic information to the ribosomes
Definition
Messenger RNA (mRNA) copies DNA’s code & carries the genetic information to the ribosomes
Term
_________ ____ (_RNA), along with protein, makes up the ribosomes
Definition
Ribosomal RNA (rRNA), along with protein, makes up the ribosomes
Term
_________ ____ (_RNA) transfers amino acids to the ribosomes where proteins are synthesized
Definition
Transfer RNA (tRNA) transfers amino acids to the ribosomes where proteins are synthesized
Term
Messenger RNA:
_____ _____ chain of Nucleotides
Made in the _______
Copies DNA & leaves _____ _______ ______
Contains the Nitrogen Bases _, _, _, _
Definition
Long Straight chain of Nucleotides
Made in the Nucleus
Copies DNA & leaves through nuclear pores
Contains the Nitrogen Bases A, G, C, U ( no T )
Term
Sequence of 3 bases called ______
Definition
Codon
Term
Ribosomal RNA (rRNA)
Made inside the ______ of a cell
Associates with _______ to form ribosomes
Site of _____ _______
Definition
Made inside the nucleus of a cell
Associates with proteins to form ribosomes
Site of protein Synthesis
Term
A codon designates an ____ _____
An amino acid may have more than ____ ____
Definition
A codon designates an amino acid
An amino acid may have more than one codon
Term
On DNA:
A-__
C-__
On RNA:
_-_
_-_
Definition
On DNA:
A-T
C-G
On RNA:
A-U
C-G
Term
Transfer RNA (tRNA)
_____-____ shape
Single stranded molecule with attachment site at one end for an ____ ____
Opposite end has three nucleotide bases called the ______
Definition
Transfer RNA (tRNA)

Clover-leaf shape
Single stranded molecule with attachment site at one end for an amino acid
Opposite end has three nucleotide bases called the anticodon
Term
The 3 bases of an anticodon are ______ to the 3 bases of a ____
Example: Codon ACU
Anticodon ___
Definition
The 3 bases of an anticodon are complementary to the 3 bases of a codon
Example: Codon ACU
Anticodon UGA
Term
Pathway to making a protein
DNA

_RNA

t___ (______)

_____
Definition
DNA
mRNA

tRNA (ribosomes)

Protein
Term
Protein Synthesis
Two phases: ________ & ______
mRNA must be ______ before it leaves the nucleus of eukaryotic cells
Definition
Two phases: Transcription & Translation
mRNA must be processed before it leaves the nucleus of eukaryotic cells
Term
The process of copying the sequence of one strand of DNA, the ______ ____
_____ copies the template strand
Requires the enzyme ____ _______
Definition
The process of copying the sequence of one strand of DNA, the template strand
mRNA copies the template strand
Requires the enzyme RNA Polymerase
Term
____ Strand
_______ Strand
_____ Strand
Side that does not code the RNA
Definition
Top Strand
Coding Strand
Sense Strand
Term
____ Strand
_______ Strand
_____ Strand
Side that does not code the RNA
Definition
Bottom Strand
Template Strand
Antisense Strand
Term
During transcription, ___ _______ binds to ____ and separates the DNA strands
____ ______ then uses one strand of DNA as a template to assemble nucleotides into _______
Definition
During transcription, RNA polymerase binds to DNA and separates the DNA strands
RNA Polymerase then uses one strand of DNA as a template to assemble nucleotides into RNA
Term
______ are regions on DNA that show where RNA Polymerase must bind to begin the Transcription of RNA
Called the _____ box
Specific base sequences act as signals to _____
Called the ______ signal
Definition
Promoters are regions on DNA that show where RNA Polymerase must bind to begin the Transcription of RNA
Called the TATA box
Specific base sequences act as signals to stop
Called the termination signal
Term
After the DNA is transcribed into RNA, editing must be done to the nucleotide chain to make the RNA _____
______, non-functional segments of DNA are snipped out of the chain
Definition
After the DNA is transcribed into RNA, editing must be done to the nucleotide chain to make the RNA functional
Introns, non-functional segments of DNA are snipped out of the chain
Term
_____, segments of DNA that code for proteins, are then rejoined by the enzyme ______
Definition
Exons, segments of DNA that code for proteins, are then rejoined by the enzyme ligase
Term
mRNA leaves the nucleus through its pores and goes to the ______
Definition
mRNA leaves the nucleus through its pores and goes to the ribosomes
Term
______ is the process of decoding the mRNA into a polypeptide chain
Ribosomes read mRNA three bases or _ _____ at a time and construct the proteins
Definition
Translation is the process of decoding the mRNA into a polypeptide chain
Ribosomes read mRNA three bases or 1 codon at a time and construct the proteins
Term
Ribosomes are made of a _____ and small subunit
Composed of _____ and ______
Have two sites for tRNA attachment --- _ and _
Definition
Ribosomes are made of a large and small subunit
Composed of rRNA (40%) and proteins (60%)
Have two sites for tRNA attachment --- P and A
Term
mRNA transcript start codon AUG attaches to the small ribosomal subunit
Small subunit attaches to large ribosomal subunit
Definition
mRNA transcript start codon AUG attaches to the small ribosomal subunit
Small subunit attaches to large ribosomal subunit
Term
Elongation=As ribosome moves, two tRNA with their amino acids move into site A and P of the ribosome
Peptide bonds join the amino acids
Definition
Elongation=As ribosome moves, two tRNA with their amino acids move into site A and P of the ribosome
Peptide bonds join the amino acids
Term
The end products of protein synthesis is a _______ structure of a protein
A sequence of ______ _____ bonded together by ______ bonds
Definition
The end products of protein synthesis is a primary structure of a protein
A sequence of amino acid bonded together by peptide bonds
Term
The _____ are cut out of RNA molecules.
The _____ are the spliced together to form mRNA.
Definition
The introns are cut out of RNA molecules.
The exons are the spliced together to form mRNA.
Term
_____ specifies the amino acid methionine or serve as a “start” codon for protein synthesis.
Definition
AUG specifies the amino acid methionine or serve as a “start” codon for protein synthesis.
Term
_______ are changes in the genetic material.

Two Types:
_______ ______
And ____ ____
Definition
Mutations are changes in the genetic material.

Two Types:
Chromosome Mutations
And Gene Mutations
Term
Mutations that produce changes in a single gene are known as _____ ___________.
Mutations that produce changes in whole chromosomes are known as _______ ________.
Definition
Mutations that produce changes in a single gene are known as gene mutations.

Mutations that produce changes in whole chromosomes are known as chromosomal mutations.
Term
Gene mutations involving a change in _____ _ _____ nucleotides are known as _______ mutations because they occur at a _____ point in the DNA sequence.
Definition
Gene mutations involving a change in one or a few nucleotides are known as point mutations because they occur at a single point in the DNA sequence.
Term
_____ usually affect no more than a single amino acid.
Definition
Substitutions usually affect no more than a single amino acid.
Term
The _______ or _____ of a nucleotide causes a shift in the grouping of codons.
Changes like these are called ______ ______
Definition
The addition or deletion of a nucleotide causes a shift in the grouping of codons.
Changes like these are called frameshift mutations
Term
Frameshift mutations may change ______ amino acid that _____ the mutation.
Frameshift mutations can alter a ____ so much that it is ____ to perform its _____ functions
Definition
Frameshift mutations may change every amino acid that follows the mutation.
Frameshift mutations can alter a protein so much that it is unable to perform its normal functions
Term
Silent mutations
Definition
Mutations where the Amino Acid Stays same
Term
Missense mutations
Definition
Different Amino Acid
Term
Nonsense Mutations
Definition
Early Stop
Term
In _______ ________, biologists make changes in the DNA code of a living organism.
Definition
In genetic engineering, biologists make changes in the DNA code of a living organism.
Term
During ________, a cell takes in DNA from outside the cell. The external DNA becomes a component of the cell's DNA.

This change to the DNA molecule is known as DNA ________.
Definition
During transformation, a cell takes in DNA from outside the cell. The external DNA becomes a component of the cell's DNA.

This change to the DNA molecule is known as DNA recombination.
Term
An organism with modified DNA is called ______
Definition
An organism with modified DNA is called TRANSGENIC
Term
Glycolysis is the _____ phase of ____ _____
Definition
1st phase of aerobic respiration
Term
Define Glycolysis
Definition
Process that partially breaks down glucose and harvests some of its energy
Term
Where does Glycolysis occur
Definition
Cytoplasm
Term
What organisms does Glycolysis take place in?
Definition
All organisms
Term
Beginning equation of Glycolysis
Net gain of ATP in Glycolysis
Definition
Glucose + 2 ATP + 2 NAD+ + 4 ADP + 4Pi
Net gain of 2 ATP
Term
Step 1 of Glycolysis is called
And define
Definition
Energy investment step
ATPs provide enough energy for whole reaction
Term
Why would delta G be negative in Glycolysis?
Why positive?
Definition
Negative if ATP is broken down
Positive if ATP is built, besides when 1,3 -Bisphosphoglycerate because it is unstable
Term
Kinase
Definition
Moves phosphate group
Term
Isomerase/Multase
Definition
Same atoms rearranged
Term
G3P
Definition
Glyceraldehyde 3-phosphate
Term
PEP
Definition
Phosphoenolpyruvate
Term
DHAP
Definition
Dihydroxyacetone phosphate
Term
After glucose and before pyruvate in Glycolysis everything is considered an ______
Definition
intermediate
Term
Three irreversible Reactions
1.
3.
10.
why random numbers?
what do they all have in common
Definition
1. hexokinase
3. phosphofructokinase
10. pyruvate kinase
numbers are what step
very negative delta G
Term
Why are the three irreversible Glycolysis reactions irreversible
Definition
Because them backwards would have a very high delta G
Term
PEP definition
Definition
Inhibitor for the 3rd step. Feed back inhibition
Term
ADP- Hard to say what the three are
1. _____ signals
2. _____ of this = ______ of ______
3. Activator of ________
Definition
1. Hunger
2. Alot of this = a lot of ATP
3. phosphofructokinase
Term
Aresenate
What does it affect?
What does that ^ cause?
Definition
Affects GAP dehydrogenase
Prevents Phosphate from being added to sugar
Term
Iodoacetate
What does it affect?
What does that ^ cause?
Definition
Affects GAP dehydrogenase
Covalently binds to active site of enzyme
Term
Fluoride ion
What does it affect?
What does that ^ cause?
Definition
Affects Enolase
Sticks to Mg+2 ion at active site and blocks substrate from entering
Term
Where does fermentation take place
Definition
Cytoplasm
Term
Fermentation Reaction
and why
Definition
Reaction to recycle NADH to NAD+ in the absence of oxygen
So you can still do glycolosis
Term
Three steps of Aerobic Respiration
1.
2. Two parts technically
3.
Definition
1. Glycolosis
2. Link/Transition Phase & Citric Acid/Krebs Cycle
3. Oxidative Phosphorylation
Term
Reactants of Link/Transition Phase
1.
2.
3.
Definition
Pyruvate
NAD+
Coenzyme A
Term
Products of Link/Transition Phase
1.
2.
3.
Definition
CO2
Acetyl CoA
NADH
Term
Reactants of Krebs Cycle
1.
2.
3.
4.
And what to remember about them
Definition
Acetyl CoA
3NAD+
ADP + P
FAD
Since Glycolosis produces two pyruvates, they are technically doubled
Term
Products of of Krebs Cycle
1.
2.
3.
4.
5.
And what to remember about them
and where is energy stored?
Definition
2 CO2
ATP- I think Energy Stored
3 NADH-Energy Stored
FADH2-Energy Stored
Coenzyme A
Since Glycolosis produces two pyruvates, they are technically doubled
Term
4 Carbon molecule, last molecule in Krebs cycle before it repeats
Definition
Oxaloacetate
Term
6 Carbon molecule, first molecule of Krebs cycle after CO2+CoA
Definition
CItrate
Term
Isomer of Citrate
Definition
Isocitrate
Term
What is a pyruvate?
Definition
Three carbon molecule
Term
Kinetic Energy
Definition
Energy or motion
Term
Potential Energy
Definition
Stored Energy
Term
Concentration gradient potential energy
Used in?
Definition
(Used in Secondary Active Transport) Energy due to concentration gradient
Term
Chemical energy
Where is energy stored?
What two groups of bonds?
Definition
Carbon-Carbon bonds
High energy phosphate-phosphate bonds
Energy stored in bonds
Term
Photosynthesis chemical formula
Definition
Sun energy + 6H20 + 6 CO2 = C6H12O6 + 6O2 (Chemical energy)
Term
Respiration chemical formula
Definition
C6H12O6 + 6O2 = 6H20 + 6 CO2 + Chemical Energy (in form of ATP)
Term
Anabolic Reactions
Two Examples
Define
Definition
Photosynthesis, Condensation
Builds something up & Requires energy
Term
Catabolic Reactions
Two Examples
Define
Definition
Respiration, Hydrolysis
Break something down & Releases Energy
Term
First Law of Thermodynamics
Definition
Law of Conservation of Energy
Term
Second Law of Thermodynamics
Definition
Free energy is the energy available to do work
Always decreasing
Term
Entropy
Definition
Measure of disorder. Always increasing in a closed system
Term
Transition State
Definition
Change from stable to unstable for a change to occur
Term
Activation Energy
Definition
Energy required to get the reactants into an unstable transition state
Term
ATP macromolecule category & Type
Definition
Nucleic Acid
RNA Nucleotide
Term
Substrate Level Phosphorylation
Definition
Take phosphate off ATP & put onto something else to give it energy
X + O + ATP =-Enzyme XO + AMP + PPi + light
Term
Coupled Reaction
Definition
Energy is transferred from one side of the reaction to the other.
Term
Extra hydrogens equals ____ _____
Definition
Extra Electrons
Term
Another type of electron carrier besides NAD+
Definition
FADH2
Term
Allosteric Site
Definition
The place on an enzyme where a molecule that is not a substrate may bind, thus changing the shape of the enzyme and influencing its ability to be active.
Term
Irreversible Inhibitors
Definition
Permanently destroys enzyme, not common in cells
Term
Activators
Definition
Molecules that bond to allosteric sites and support the binding of the substrate at the active site
Term
Exergonic
Definition
negative delta G
spontaneous
Term
Endergonic
Definition
Positive delta G
nonspontaneous
Term
Induced Fit Model
Definition
Enzyme changes shape slightly as the substrate bonds
Term
Lock and Key Model
Definition
Substrate bonds to active site and then its bonds are weakened and produces two or more things
Term
Competitive Inhibitor
Definition
Inhibitor binding to active site
Term
Noncompetitive inhibitor
Definition
Inhibitor binding to allosteric site thus changing shape of enzyme
Term
Resulting equation of Glycolysis
What is used in Krebs/Link
Definition
2 pyruvates + 2 ADP + 2Pi + 4 ATP + 2NADH
Pryuvates used in Link/Krebs Cycle becomes Acetyl CoA which is used in Krebs
Term
Lactic Acid Fermentation Equation
Definition
2 Pyruvic acid + 2 NADH + 2H+ = 2NAD+ + 2 Lactic Acid
Term
Alcohol Fermentation Equation
Definition
2 Pyruvic acid have 2 CO2 removed to become Acetaldehyde
THEN
2 Acetaldehyde 2 NADH + 2H+ = 2NAD+ + 2Ethanol
Term
Where does Transition Phase occur
Definition
Mitochondrion Matrix
Term
Reactants of Oxidative Phosphorylation
1.
2.
3.
4.
5.
Definition
3ADP
3Pi
NADH
1/2 O2
Bunch of H+
Term
Products of Oxidate Phosphorylation
1.
2.
3.
4.
5.
Definition
3ATP
H20
NAD+
H
FAD+
Term
ATPs made from all Aerobic Respiration
How many in Glycolysis?
How many in Link
How many in Krebs
How many in Oxidative
Definition
36 total
net of 2 from Glycolysis
0 from link
2 from Krebs
32 from Oxidative
Term
How many NADH and FADH in:
Glycolysis
Link
Krebs
Definition
2 NADH in Glycolysis
2 NADH in Link
6 NADH and 2 FADH2 in Krebs
Term
How many ATPs do NADH produce
How many ATPs do FADH2 produce
How many ATPs do the 2 NADHs from Glycolysis make
Definition
NADH= 3 ATP
FADH2= 2 ATP
NADH from Glycolysis= 2 ATP due to passing though mitochondrion membrane
Term
Electron Transport chain
Two things that occur and where
Well three sort of
Definition
NADH = NAD+ occur on integral membrane protein
FADH2 = FAD+ Integral membrane protein DIFFERENT then the NADH
Oxygen collects e- and becomes water and the hydrogen goes to ATP synthase
Term
Yeast does ____ fermentation
Humans do _____ fermentation
Definition
Yeast does Ethanol Fermentation
Humans do Lactic Acid Fermentation
Term
Oxidative puts NADH to NAD+ while _______ does so as well but without something
Definition
Fermentation does so without oxygen
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