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Bio 2 chpt: 27
Bacteria and Archaea
69
Biology
Undergraduate 2
03/05/2015

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Term
Prokaryote characteristics
Definition

Most are unicellular, some colonial

.5-5 micrometers

wide variety of shapes

 

Term
Functions of cell wall
Definition

protects cell

keeps from bursting in hypotonic

maintains cell shape

Term
Bacterial cell wall structure
Definition

made of peptidoglycan

vs chitin or cellulose in eukaryotes

 

Term
peptidoglycan
Definition
bacteria cell wall structure; a polymer composed of modfified sugars cross-linked by short polypeptides.
Term
cell wall of archaea
Definition
have polysaccharides and lipids but not peptidoglycan
Term
Gram positive bacteria
Definition

a large amount of peptidoglycan

traps crystal violet

Term
Gram negative
Definition

less peptidoglycan 

more complex structure

has liposaccharides

crystal violet rinsed away revealing red dye

Term
Capsule
Definition

dense well defined sticky layer of polysaccharides or proteins in prokaryotes

allows to stick in a colony

or shield pathogenic prokaryotes

Term
endospore
Definition

resistant cells that has a copy of chromosome

 bacteria develop it in harsh conditions. 

halts metabolism until condition in right

 

Term
fimbriae
Definition

allows prokaryotes to stick to substrates or others

hairlike appendages

shorter and more numerous than pili

Term
taxis
Definition

a directed toward or away from a stimulus

 

Term
chemotaxis
Definition
toward or away from a chemical stimulus
Term
how do  most prokaryotes propell themselves
Definition
with flagella composed of different proteins
Term
flagella
Definition

scattered or on both ends of a prokaryotes

made up of proteins 

arose independently in archaea, bactera, and eukaryotes

 

Term
internal organization and dna
Definition

circular chromosomes

lacks a nucleus, has a nucleoid

may have plasmids

smaller ribosomes

 

Term
plasmids
Definition
smaller rings of independently replicating DNA molecules
Term
nucleoid
Definition
a region of cytoplasm that is not enclosed by a membrane
Term
prokaryote reproduction
Definition

reproduce by binary fission 

divide every 1-3 hours

they are small

short generation times

Term
genetic variation
Definition

high in prokaryotes

from rapid reproduction

mutation

genetic recombination

Term
rapid reproduction and mutation
Definition

many cells are genetically indentical via binary fission

mutation is low but in rapid reproduction increases mutation rate

high diversity allows for rapid evolution

Term
Genetic recombination
Definition

the otherway of genetic diversity in prokaryotes

combining of DNA from 2 sources

no sex, but conjugation, transduction, and transformation can bring dna from other prokaryotes

horizontal gene transfer

Term
horizontal gene transfer
Definition
movement of genes from one organism to another
Term
transformation
Definition
genotype and phenotype sometimes are altered by uptake of foreign dna
Term
transduction
Definition
movement of genes between bacteriophages and bacteria
Term
Dna transfer (conjugation)
Definition

one way

donor cell attaches to cell and pulls it closer by a pilus

f factor is required for pili

Term
R plasmid
Definition

resistant genes that are ineffective to antibiotics

antibiotics kill those without specific R plasmid

nat selection increases R plasmids when a pop is exposed to antibiotics

Term
f factor as a plasmid
Definition

cells with an f plasmid are dna donors

without are reciepients

f factor is transferable by conjugation

Term
Obligate anaerobes
Definition
poisoned by o2, use fermentation or anaerobic respiration other than o2
Term
Obligate Aerobes
Definition
must use o2 for cell respiration
Term
Phototrophs
Definition
energy from light
Term
Chemotrophs
Definition
energy frmo chemicals
Term
heterotrophs
Definition
at least 1 organic ingredient to make other organic compounds
Term
autotrophs
Definition
only need CO2 or related compounds a carbon source
Term
Facultive Anaerobes
Definition
use o2 if its present, but can do fermentation or anaerobic respiration
Term
Nitrogen Metabolism
Definition
prokaryotes can metabolize n2 in many forms
Term
nitrogen fixation
Definition
prokaryote metabolize of n2 to nh3 ammonia
Term
Metabolics Cooperation
Definition
prokaryotes cooperate with other cells to recieve environmental resources they couldn't with other cells
Term
Biofilm
Definition
metabolic cooperation with other cells
Term
Prokaryotes are related into a diverse set of lineages
Definition

gen diversity is immense

horizontal gene transfer played a key role in evolution, aquired from distant species

Term
Archaea
Definition
share certain traits with bacteria and other with eukaryotes
Term
Extremephiles
Definition
sp,e archaea live in extreme conditions
Term
Extreme Halophiles
Definition
live in highly saline environment
Term
Extreme thermophiles
Definition
thrive in very hot environments
Term
Methanogens
Definition
live in swamps and marshes and produce methane as a byproduct
Term
Bacteria
Definition

include the vast majority of prokaryotes

diverse nutritional types are scattered between major groups of bacteria

Term
Proteobacteria
Definition

include photoautotrophs, chemoautotrophs, and heterotrophs

can be anaerobic and aerobic

Term
Alpha proteobacteria
Definition

many species are closely related with euk hosts

hypothesis that mitochondria evolved from aerobic proteobacteria through symbiosis

Term
beta proteobacteria
Definition

the nutritionally diverse proteobacteria

notrosomonas, soil bacteria nitrogen recycling

Term
Gamma proteobacteria
Definition
sulfur bacteria and e. coli
Term
Delta Proteobacteria
Definition
includes myxobacteria and bacteria that attacks other bacteria
Term
Epsilon proteobacteria
Definition

most species are pathogenic to humans

 

Term
Chlamydias
Definition
most are parasites that survive only in animal cells
Term
Spirochetes
Definition

helical heterotrophs

some are parasites, syphilis and lyme disease

Term
Cyanobacteria
Definition

gram negative photoautotrphs

plantlike, oxygen generating photosynthesis

plant chloroplast likely evolved from cyanobacteria through endosymbiosis

Term
Gram Pos Bacteria
Definition

actinomyocetes

baccillus anthraxus

mycoplasms

Term
Chemical recycling
Definition

prokaryotes play a major role in recycling elements in environments

they can sometimes increase phosphorous, nitrogen, and potassium for plant growth

can sometimes decrease nutrients

Term
Decomposers
Definition
chemoheterotrophic prokaryotes, breaking down dead organisms and waste products, unlocking supplies of carbno, nitrogen, and other elements
Term
Symbiosis
Definition

ecological relationship between 2 species that live in close contact, a larger host and a smaller symbiont

Prokaryotes often form relationships with large organisms

Term
mutualism
Definition
both benefit
Term
commensalism
Definition
one species benefits the other is not harmed
Term
parasitism
Definition
where one benefits and other is hurt but not killed
Term
parasite
Definition
eats the cell contents, tissues, or body fluids of its host.
Term
Pathogenic bacteria
Definition
nearly half of all human diseases come from pathogenic bacteria
Term
Exotoxins
Definition
are proteins secreted by certain bacteria
Term
Endotoxins
Definition
are lipopolysaccharide components of the outer membrane of gram negative bacteria, endotoxins are released
Term
Bioremediation
Definition
use of prokaryotes to stop pollutants in environments
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