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Bio-150 Final Exam
Wofford College Bio-150 Final Exam
320
Biology
Undergraduate 1
12/08/2011

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Term
pathogenic
Definition
capable of causing harm
Term
observation
Definition
when we use our senses or an extension of our senses (microscope, sound recorder, x-ray, thermometer, etc.) to record an event.
Term
hypothesis
Definition
a statement that provides a possible answer to a question or an explanation for an observation that can be tested
Term
controlled experiment
Definition
allows scientists to construct a situation so that only one variable is present
Term
inductive reasoning (induction)
Definition
the process of developing general principles from the examination of many sets of specific facts (specific-->general)
Term
deductive reasoning (deduction)
Definition
the process of using general principles to predict the specific facts of a situation (general-->specific)
Term
scientific theory
Definition
a widely accepted, plausible, general statement about fundamental concepts in science that explain "why" things happen
Term
scientific law
Definition
a uniform or constant fact of nature that describes "what" happens in nature
Term
how scientists communicate with one another
Definition
scientific journals, etc.
Term
pseudoscience
Definition
a deceptive practice that uses the appearance or language of science to convince, confuse, or mislead people into thinking that something has scientific validity
Term
When can the scientific method only be applied?
Definition
It can only be applied to questions that have factual bases. Ethical, moral, and religious concerns are not scientific endeavors.
Term
energy
Definition
the ability to do work or cause things to move
Term
matter
Definition
anything that has mass and takes up space
Term
cells
Definition
the fundamental structural units of all living things; nonliving materials, such as rocks, water, and gases, do not have a cellular structure
Term
organism
Definition
any living thing that is capable of functioning independently, whether it consists of a single cell or a complex group of interacting cells
Term
metabolism
Definition
all of the chemical reactions involving molecules required for a cell to grow, reproduce and make repairs
Term
generative processes
Definition
activities that result in an increase in the size of an organism--growth--or an increase in the number of individuals in a population--reproduction
Term
responsive processes
Definition
allow organisms to react to changes in their surroundings in a meaningful way
Term
irritability
Definition
an individual's ability to recognize that something in its surroundings has changed (a stimulus) and respond rapidly to it (ex. bad smell, loud noise, etc.)
Term
control processes
Definition
mechanisms that ensure an organism will carry out all metabolic activities in the proper sequence (coordination) and at the proper rate (regulation)
Term
enzymes
Definition
molecules produced by organisms that are able to control the rate at which life's chemical reactions occur.
Term
regulation
Definition
involves altering the rate of processes
Term
homeostasis
Definition
the process of maintaining a constant internal environment
Term
emergent properties
Definition
the never-before-seen features that result from the interaction of simple components when they form much more complex substances
Term
steps of the scientific method
Definition
OHEP (Only Hippos Eat Paper): Observation, Hypothesis, Experiment, Prediction
Term
theory
Definition
a large hypothesis that has been tested many times and continually supported
Term
predictions
Definition
"if...then" statements derive from the hypothesis
Term
empirical approach
Definition
relies on successful methods of observation and demonstration of ideas (science is an empirical approach)
Term
photophores
Definition
the sites on fish where chemical reactions take place to produce bioluminescence
Term
possibilities of bioluminescence (12)
Definition
lure with an external light (lights all over the fish), startle, counter-illumination, misdirection:smokescreen, distractive body parts, burglar alarm, sacrificial tag, warning coloration, lure prey or attract host, stun or confuse prey, illuminate prey, mate attraction/recognition
Term
Barreleye Fish
Definition
has a transparent head and its eyes (sacs in the head) can look either upward or forward
Term
Bobtail Squid
Definition
uses bioluminescence to camouflage it; the bioluminescent bacteria may help us in the medical field to create pharmaceuticals; the military could use this concept and learn from it to create better camouflage
Term
transgenic organisms
Definition
contain a gene or genes that have been artificially inserted instead of the organism acquiring them from reproduction
Term
reporter gene
Definition
A gene whose phenotypic expression is easy to monitor; used to study promoter activity in different tissues or developmental stages.
Term
Community
Definition
an assemblage of populations of different species interacting with one another in the same environment (ex: a fallen log; because plants, fungi, worms, and insects all interact with one another to form a community)
Term
Species richness
Definition
a listing of the various species found in that community
Term
Species Diversity
Definition
includes both species richness and species evenness, or the relative abundance of the different species
Term
habitat
Definition
a particular place where a species lives and reproduces
Term
Ecological Niche
Definition
the role a species plays in its community, including its habitat and its interactions with other organisms
Term
Abiotic factors
Definition
climate, habitat, etc.
Term
biotic factors
Definition
competitors, parasites, and predators
Term
Fundamental Niche
Definition
comprises of all the abiotic conditions under which a species could survive when adverse biotic conditions are absent
Term
Realized Niche
Definition
comprises of those conditions under which a species does survive when adverse biotic interactions, such as competition and predation, are present
Term
Which is larger: Fundamental niche or Realized niche?
Definition
A species' fundamental niche tends to be larger than its realized niche
Term
Competitive exclusion principle
Definition
states that no two species can indefinitely occupy the same niche at the same time
Term
Resource partitioning
Definition
decreases competition between two species, leading to increased niche specialization and less niche overlap (ex: owl and hawk populations; owls and hawks feed on similar prey (small rodents), but owls are nocturnal hunters and hawks are diurnal hunters. What could have been one niche became two more specialized niches because of divergence of behavior.
Term
Character displacement
Definition
the tendency for characteristics to be more divergent when populations belong to the same community than then they are isolated
Term
Predation
Definition
Occurs when one living organism, called the predator, feeds on another, called the prey
Term
Do predators reduce the population density of prey?
Definition
Not only do predators reduce the population density of prey, but the population density of the predator can be affected by the prevalence of the prey. The predator-prey relationship is a two-way street.
Term
Prey Defenses
Definition
mechanisms that thwart the possibility of being eaten by a predator. Prey have evolved a variety of mechanisms that enable them to avoid predators, including heightened senses, speed, protective armor, protective spines or thorns, tails and appendages that break off, and chemical defenses. Also, prey use camouflage to avoid capture by a predator.
Term
Camouflage
Definition
the ability to blend into the background
Term
Warning coloration
Definition
tells the predator that the prey is potentially dangerous
Term
Mimicry
Definition
occurs when one species resembles another that possesses an overt antipredator defense
Term
Symbiotic Relationships
Definition
Paricitism, Symbiosis, commensalism
Term
Paracitism
Definition
is similar to predation in that an organism, called the parasite, derives nourishment from another, called the host.
Term
Symbiosis
Definition
An association in which at least one species is dependent on the other
Term
Commensalism
Definition
a symbiotic relationship between two species in which one species is benefited, and the other is neither benefited nor harmed (often turns out to be an instance of either mutualism or parasitism)
Term
parasitism
Definition
abundance of parasite increases, and abundance of host decreases
Term
commensalism
Definition
abundance of one species increases, and the other is not affected
Term
mutualism
Definition
abundance of both species increases (cleaning symbiosis: symbiotic relationship in which crustaceans, fish, and birds act as cleaners for a variety of vertebrate clients)
Term
Coevolution
Definition
present when two species adapt in response to selective pressure imposed by the other
Term
Ecological succession
Definition
a change involving a series of species replacements in a community (primary succession occurs in areas where there is no soil formation, such as following a volcanic eruption or a glacial retreat; secondary succession occurs in areas where soil is present, as when a cultivated field, such as a cornfield in New Jersey, returns to a natural state)
Term
pioneer species
Definition
the first species to begin secondary succession
Term
climax community
Definition
F.E. Clements proposed that succession in a particular area will always lead to the same type of community (climax community)
Term
facilitation model of succession
Definition
each stage of the succession of a plot of land facilitated the invasion and replacement by organisms of the next stage.
Term
inhibition model
Definition
predicts that colonists hold onto their space and inhibit the growth of other plants until the colonists die or are damaged
Term
tolerance model
Definition
predicts that different types of plants can colonize an area at the same time
Term
autotrophs
Definition
require only inorganic nutrients and an outside energy source to produce organic nutrients for their own use and for all the other members of a community (they are called producers)
Term
Heterotrophs
Definition
need a preformed source of organic nutrients as they acquire food from a different source; they are called consumers because they consume food that was generated by a producer
Term
Carnivores
Definition
feed on other animals; birds that feed on insects are carnivores, and so are hawks that feed on birds and small mammals
Term
omnivores
Definition
animals that feed on both plants and animals (ex: chickens, raccoons, humans)
Term
detritivores
Definition
organisms that feed on detritus, which is decomposing particles of organic matter (ex: marine fan worms filter detritus from the water; earthworms, some beetles, termites, and ants are all terrestrial detritivores)
Term
Decomposers
Definition
Perform a valuable service because they release inorganic substances that are taken up by plants once more. Otherwise, plants would be completely dependent only on physical processes, such as the release of minerals from rocks, to supply them with inorganic nutrients.
Term
Energy flow
Definition
begins when producers absorb solar energy; energy is lost through heat as it gets passed on from organism to organism (food chain/web)
Term
chemical cycling
Definition
begins when producers take in inorganic nutrients from the physical environment
Term
First and second laws of thermodynamics
Definition
1) energy can neither be created or destroyed; 2) with every transformation, some energy is degraded into a less available form such as heat
Term
food web
Definition
diagram that describes trophic (feeding) relationships
Term
food chain
Definition
diagram that shows a single path of energy flow in an ecosystem
Term
trophic level
Definition
a level of nourishment within a food web or chain
Term
ecological pyramid
Definition
the flow of energy with large losses between successive trophic levels
Term
biomass
Definition
the number of organisms multiplied by the dry weight of the organic matter within one organism; the biomass of the producers is expected to be greater than the biomass of the herbivores, and that of the herbivores is expected to be greater than that of the carnivores
Term
reservoir
Definition
a source normally unavailable to producers, such as the carbon present in calcium carbonate shells on ocean bottoms.
Term
exchange pool
Definition
source from which organisms do generally take chemicals, such as the atmosphere or soil
Term
transfer rate
Definition
the amount of a substance that moves from one component of the environment to another within a specified period of time
Term
The stages of the Water Cycle
Definition
1) evaporation 2) condensation 3) precipitation 4) percolation (water that sinks into the ground and saturates the earth to a certain level)
Term
groundwater/water table
Definition
the top of the saturation zone
Term
Steps of The Carbon Cycle
Definition
1) carbon is returned to the atmosphere as CO2 from respiration (plants and animals) 2) CO2 then recycles to plants by way of the atmosphere 3) Carbon dioxide from the air combines the water to produce bicarbonate ion (HCO3) 4) decomposition of organisms returns CO2 to the atmosphere
Term
Steps of The Phosphorus Cycle
Definition
1) Phosphorus, trapped in oceanic sediments, moves onto land due to a geologic uplift. 2) on land, very slow weathering of rocks places phosphate ions in the soil. 3) Some of these ions become available to plants 4) Animals eat producers and incorporate some of the phosphate into their teeth, bones, shells, which take many years to decompose. 5) Decomposition makes phosphate available to producers once again
Term
Steps of The Nitrogen Cycle
Definition
1) Nitrogen fixation occurs when nitrogen gas is converted to ammonium, a form plants can use. 2) Plants can also use nitrates as a source of nitrogen. The production of nitrates during then nitrogen cycle is called nitrification. 3) During the process of assimilation, plants take up NH4+ and NO3- from the soil and use these ions to produce proteins and nucleic acids. 4) Nitrogen-based fertilizers increase the nitrogen content in the soil. 5) Acid deposition occurs because nitrogen oxides and sulfur dioxide enter the atmosphere from the burning fossil fuels. Both of these gases combine with water vapor to form acids that eventually return to the earth.
Term
habitat
Definition
the place where an organism lives
Term
population
Definition
all the organisms belonging to the same species within an area at the same time
Term
community
Definition
all the various populations of multiple species interacting at a locale
Term
biosphere
Definition
encompasses the zones of the Earth's soil, water, and air where living organisms are found
Term
ecotone
Definition
A transition zone between ecosystems which has the mixture of organisms from the adjacent ecosystems
Term
demography
Definition
the statistical study of a population, such as its density, its distribution, and its rate of growth, which is dependent on such factors as its mortality pattern and age distribution
Term
population density
Definition
number of individuals per unit area
Term
population distribution
Definition
the pattern of dispersal of individuals across an area of interest
Term
limiting factors
Definition
environmental aspects that particularly determine where an organism lives
Term
Three descriptions of patterns of distribution
Definition
clumped, random, and uniform
Term
cohort
Definition
all of the members of a population born at the same time
Term
survivorship
Definition
the probability of newborn individuals of a cohort surviving to particular ages
Term
Type I survivorship curve
Definition
individuals survive well past the midpoint of the life span, and death does not come until near the end of the life span (large mammals, humans in MDCs)
Term
Type II survivorship curve
Definition
survivorship decreases at a constant rate throughout the life span. (songbirds, small mammals, etc.)
Term
Type III survivorship curve
Definition
typical of a population in which most individuals die very young. (invertebrates, fish, humans in LDCs)
Term
Three major age groups
Definition
prereproductive, reproductive, postreproductive
Term
Semelparity
Definition
the members of the population have only a single reproductive event in their lifetime. When the time for reproduction draws near, the mature adults cease to grow and expend all their energy in reproduction, and then die. (many insects, annual plants)
Term
Iteroparity
Definition
Members of the population experience many reproductive events throughout their lifetime. (most vertebrates, shrubs, and trees)
Term
Exponential growth
Definition
the number of individuals added each generation increases as the total number of females increases
Term
Logistic Growth
Definition
S-curved shape; has a carrying capacity
Term
Carrying Capacity
Definition
the environmental carrying capacity is the maximum number of individuals of a given species the environment can support.
Term
Density-dependent factor
Definition
the intensity of the effect does not increase with increases in population density (abiotic factors such as droughts, freezes, hurricanes, floods, and forest fires)
Term
density-dependent factors
Definition
the percentage of the population affected does increase as the density of the population increases (biotic factors such as competition, predation, and parasitism)
Term
R-selection strategists
Definition
small individuals that mature early and have a short life span
Term
opportunistic species
Definition
bacteria, some fungi, many insects, rodents, and annual plants (such organisms are often very good dispersers and colonizers of new habitats)
Term
K-selection strategists
Definition
allocate energy to their own growth and survival and to the growth and survival of their offspring. (long lived plants, birds of prey, and large mammals)
Term
More-Developed Countries
Definition
countries with low population growth and a good standard of living (North America, Europe, Japan, and Australia)
Term
Less-Developed Countries
Definition
countries where population growth is expanding rapidly and the majority of people live in poverty (Latin America, Africa, and Asia)
Term
Demographic transition
Definition
the sequence of events of population growths (i.e. decreased death rate followed by decreased birth rate)
Term
Replacement Reproduction
Definition
If there are more young women entering the reproductive years than there are older women leaving them.
Term
Interspecific
Definition
different species
Term
intraspecific
Definition
same species
Term
What factors change population size?
Definition
Birth rate, death rate, immigration rate (coming into population), emigration rate (leaving population)
Term
What factors change population growth rate?
Definition
birth rate, immigration rate
Term
What factors limit population growth?
Definition
Abiotic (habitat, climate, etc.) and biotic (predation, competition, parasitism, etc.) factors
Term
Conservation biology
Definition
a relatively new discipline of biology that studies all aspects of biodiversity with the goal of conserving natural resources for this generation and all future generations.
Term
Bioinformatics
Definition
science of collecting, analyzing, and making readily available biological information
Term
Biodiversity
Definition
the variety of life on earth; the number species among various group of organisms
Term
endangered species
Definition
one that is in peril of immediate extinction throughout all or most of its range
Term
threatened species
Definition
organisms that are likely to become endangered species in the foreseeable future
Term
Genetic diversity
Definition
refers to variations among the members of a population
Term
Ecosystem diversity
Definition
dependent on the interactions of a species at a particular locale
Term
Landscape diversity
Definition
involves a group of interacting ecosystems; within one landscape, for example, there may be plains, mountains, and rivers.
Term
Biogeochemical Cycles
Definition
Ecosystems are characterized by energy flow and chemical cycling. The biodiversity within ecosystems contributes to the workings of the water, carbon, nitrogen, phosphorus, and other biogeochemical cycles.
Term
Value of Biodiversity
Definition
medicinal value, agricultural value, consumptive use value, indirect value, biogeochemical cycles, waste disposal, provision of fresh water, prevention of soil erosion, regulation of climate, and ecotourism.
Term
Biodiversity and Natural Ecosystems
Definition
Massive changes in biodiversity, such as deforestation, have a significant impact on ecosystems.
Term
Causes of extinction
Definition
Habitat loss, exotic species, pollution, and overexploitation.
Term
Humans have introduced exotic species into new ecosystems in the following ways:
Definition
Colonization, horticulture and agriculture, and accidental transport.
Term
Types of Pollution:
Definition
acid deposition, eutrophication, ozone depletion, organic chemicals, and global warming.
Term
Overexploitation
Definition
occurs when the number of individuals taken from a wild population is so great that the population becomes severely reduced in numbers.
Term
Keystone species
Definition
species that influence the variability of a community, although their numbers may not be excessively high. The extinction of a keystone species can lead to other extinctions and a loss of biodiversity.
Term
Flagship species
Definition
evoke strong emotional responses in humans
Term
Metapopulation
Definition
a population subdivided into several small, isolated populations due to habitat fragmentatio.
Term
Source population
Definition
one that most likely lives in a favorable area, and its birthrate is most likely higher than its death rate.
Term
Sink population
Definition
the environment is not as favorable and where the birthrate equals the deathrate at its best
Term
The edge effect
Definition
when preserving landscapes, it is necessary to consider the edge effect. An edge reduces the amount of habitat typical of an ecosystem because the edges around a patch have a habitat slightly different from the interior of the patch.
Term
Restoration ecology
Definition
new subdiscipline of conservation biology that seeks scientific ways to return ecosystems to their state prior to habitat degradation
Term
sustainable development
Definition
the ability of an ecosystem to maintain itself while providing services to human beings
Term
Malaria
Definition
250 million people a year get malaria; 1 million people a year die from malaria; malaria cells attack the liver, where they replicate; the malaria cells hide inside red blood cells and then attack the body all at once; Quanine is one of the only antibiotics that kills the malaria cells; only 1 particular type of mosquito transfers malaria to humans (anopheles mosquito)
Term
Invasive species
Definition
lack natural predators; generalists in their diet and habitat; reproduce and grow quickly; develop and reach sexual maturity quickly; long life-spans; introduced by humans
Term
Proximate causes
Definition
the "how" mechanisms that bring about the behavior
Term
Ultimate causes
Definition
explore the evolutionary basis ("why?") of a behavior; that is, how the behavior promotes the animal's survival or reproductive success
Term
Innate behavior
Definition
instinctive behavior patterns; an animal can perform innate behaviors at birth
Term
reflex
Definition
an instantaneous, automatic response to a stimulus
Term
taxis
Definition
a movement toward or away from a stimulus; an earthworm, for example, tends to crawl toward the high humidity of moist soil
Term
Fixed action pattern (FAP)
Definition
a motor response that is initiated by an environmental stimulus and that continues to completion, even if the stimulus is withdrawn.
Term
learning
Definition
an animal alters its behaviors as an outcome of its experiences
Term
habituation
Definition
occurs when an animal learns not to respond to a stimulus
Term
associative learning
Definition
an animal learns the relationship between two events
Term
classical conditioning
Definition
occurs when a behavior is modified
Term
operant conditioning
Definition
an animal learns to associate a behavior with its consequences
Term
imprinting
Definition
a kind of rapid learning that occurs during a restricted time in an animal's life without obvious reinforcement
Term
observational learning
Definition
animals watch what others do and imitate the behavior
Term
animal cognition
Definition
some animals, especially many mammals and birds, have cognitive abilities that extend to reasoning, problem solving, tool use, and symbolic communication.
Term
subsong
Definition
first stage of a bird song: consists of variable notes that sound little like the typical full song.
Term
piloting
Definition
an animal uses distant objects as landmarks when finding its way
Term
sun, star, or magnetic orientation
Definition
some animals can orient themselves to the landscape by maintaining a constant angle to a celestial object, such as the sun; night migrants use the moon or star patterns in the night sky to maintain their heading during their nocturnal flights; many animals can detect magnetic fields
Term
true navigation
Definition
navigation requires that an animal in unfamiliar terrain can understand its current position and make its way to a destination without using information that it collected on its way to its current position or relying on any stimulus that comes from the destination. Only a few animal species, including the homing pigeon, sea turtle, and spiny lobster, are known to use true navigation.
Term
foraging
Definition
searching for and collecting food
Term
search image
Definition
reflects an improvement in a predator's ability to detect inconspicuous prey
Term
optimal foraging theory
Definition
predicts that an animal's food-finding strategy should maximize the amount of energy (measured in calories) collected per unit time
Term
distraction displays
Definition
divert a predator's attention away from a nest or den
Term
selfish herds
Definition
individuals behaving selfishly trying to position themselves s that as many of their companions as possible are between them and the predator. In a school of fish, the result is an ever tightening group.
Term
social behaviors
Definition
interactions among members of the same species
Term
sociobiology
Definition
attempts to understand social behavior in the context of an animal's fitness
Term
sexual selection
Definition
form of natural selection that results from variation in ability to obtain mates. sexual selection can result in sexual dimorphism, a situation in which the two sexes look very different
Term
polygamy
Definition
general term that encompasses all forms of multiple mating, in which either males or females have multiple sexual partners. Polygyny is a form of polygamy in which one male has exclusive sexual access to more than one female. In polygynous animals, the male is not likely to help care for the young.
Term
monogamy
Definition
manes that both male and female have one sex partner In monogamous species, both parents typically provide care for offspring.
Term
Dominance hierarchy
Definition
social order with dominant and submissive members
Term
territory
Definition
a space that an animal defends against intruders
Term
altruistic behavior
Definition
an animal's behavior that seems to lower its fitness for the good of others
Term
inclusive fitness
Definition
the sum of direct and indirect fitness
Term
kin selection
Definition
an individual reduces its own direct fitness but assists the survival and reproduction of non-descendant relatives
Term
reciprocal altruism
Definition
individuals might help others at a cost to themselves if it is likely that they will be repaid at a later time
Term
eusociality
Definition
social structure that includes division of labor, especially in reproduction
Term
Why do birds sing?
Definition
attract mates, ward off predators
Term
How would we measure fitness?
Definition
number of offspring produced, survival rate of the offspring, number of eggs
Term
direct fitness
Definition
your own reproductive success (offspring)
Term
indirect fitness
Definition
reproductive success of your relatives
Term
3 stages of bird song:
Definition
1) subsong (like babbling by babies; random sounds)
2) Plastic song (song structure begins to take shape; elements are beginning to be put in order)
3) Crystallized song (song for a particular species; repeatable)
Term
2 Periods in song learning:
Definition
1) Sensory: when an individual is taking in the sounds around him and listening to them
2) sensorimotor: practicing the song
Term
adaptive behavior
Definition
increases an individual's evolutionary fitness relative to other individuals in the population
Term
sexual cannibalism
Definition
in some sexes, one sex (usually the female) consumes the other during sexual reproduction
Term
Genetic Material Must:
Definition
1) Be able to store information that pertains to development, structure, and metabolic activities of the cell or organism.
2) Be stable so that it can be replicated with high fidelity during cell division and be transmitted from generation to generation.
3) Be able to undergo rare changes called mutations that provide the genetic variability required for evolution to occur.
Term
Nucleotide
Definition
The basic building block of nucleic acids, such as DNA and RNA. It is an organic compound made up of nitrogenous base (A,C,T,G), a sugar, and a phosphate group.
Term
Purine Bases
Definition
Adenine (A), Guanine (G)
Term
Pyrimidine Bases
Definition
Thymine (T), Cytosine (C)
Term
Chargaff's rules
Definition
1) The amount of A,T,G, and C in DNA varies from species to species.
2) In each species, the amount of A=T and the amount of G=C.
Term
Rosalind Franklin
Definition
Used x-ray diffraction to determine the structure of DNA.
Term
James Watson and Francis H.C. Crick
Definition
Discovered the molecular structure of DNA
Term
Structure of DNA:
Definition
Double helix with sugar-phosphate backbones on the outside and paired bases on the inside. The sugar-phosphate groups are antiparallel, meaning that the sugar-phosphate groups of each strand are oriented in opposite directions.
Term
Complementary Base Pairing
Definition
Means that a purine (A,G) is always bonded to a pyrimidine (T,C). The antiparallel arrangement of the two strands ensures that the bases are oriented properly so that they can interact.
Term
DNA replication
Definition
The process of copying a DNA molecule. Following replication, there is usually an exact copy of the parental DNA double helix.
Term
DNA template
Definition
Most often a mold used to produce a shape complementary to itself. During DNA replication, each DNA strand of the parental double helix serves as a template for a new strand in a daughter molecule.
Term
Semiconservative replication
Definition
Each daughter DNA double helix contains an old strand from the parental DNA double helix and a new strand.
Term
DNA replication requires the following steps
Definition
1) Unwinding: the old strands that make up the parental DNA molecule are unwound and "unzipped" (i.e. the weak hydrogen bonds between the paired bases are broken). A special enzyme called helicase unwinds the molecule.
2) Complementary Base Pairing: new complementary nucleotides, always present in the nucleus, are positioned by the process of complementary base pairing.
3) Joining: the complementary nucleotides join to form new strands. Each daughter DNA molecule contains an old strand and a new strand

Note: Steps 2 and 3 are carried out by an enzyme called DNA polymerase. DNA polymerase works in the test tube as well as in cells.
Term
Prokaryotic DNA Replication
Definition
Bacteria have a single circular loop of DNA that must be replicated before the cell divides. The process begins at the origin of replication, a specific site on the bacterial chromosome.
Term
Eukaryotic DNA Replication
Definition
In Eukaryotes, DNA replication begins at numerous origins of replication along the length of the chromosome, and the so called replication bubbles spread bidirectionally until they meet. There is a V shape wherever DNA is being replicated (replication fork). The linear chromosomes of eukaryotes also pose another problem--DNA polymerase is unable to replicate the ends of the chromosomes. Telomeres are not copied by DNA polymerase; rather, they are added by an enzyme called telomerase, which adds the repeats after the chromosome is replicated. In stem cells, this process preserves tehe ends of the chromosomes and prevents the loss of DNA after successive rounds of replication.
Term
Prokaryotic cell
Definition
The cell of a prokaryote, i.e. an organism whose cell generally lacks a true nucleus. (ex. bacteria)
Term
Eukaryotic cell
Definition
Cells of or derived from eukaryote characterized by having a distinct, membrane-bound nucleus.
Term
Messenger RNA (mRNA)
Definition
takes a message from DNA in the nucleus to the ribosomes in the cytoplasm
Term
Transfer RNA (tRNA)
Definition
transfers amino acids to the ribosomes
Term
Ribosomal RNA (rRNA)
Definition
along with ribosomal proteins, makes up ribosomes, where polypeptides are synthesized
Term
Transcription
Definition
DNA serves as a template for RNA formation. DNA is transcribed monomer by monomer into another type of polynucleotide (RNA).
Term
Translation
Definition
The mRNA transcript directs the sequence of amino acids in a polypeptide. Like a translator who understands two languages, the cell changes a nucleotide sequence into an amino acid sequence.
Term
Codon
Definition
A set of three adjacent nucleotides, also called triplet, in mRNA that base-pair with the corresponding aniticodon of tRNA molecule that carries a particular amino acid, hence, specifying the type and sequence of amino acids for protein synthesis.
Term
Triplet Code
Definition
Each codon consists of three nucleotide bases, such as AUC.
Term
Promoter
Definition
Defines the start of transcription, the direction of transcription, and the strand to be transcribed. The binding of DNA polymerase to the promoter is the initiation of transcription.
Term
mRNA Transcript
Definition
The stop sequence causes RNA polymerase to stop transcribing the DNA and to release the mRNA molecule, now called an mRNA transcript.
Term
Intron
Definition
A noncoding sequence of dna within a gene, that is transcribed into hnrna but is then cut out of the message by rna splicing in the nucleus, leaving a mature mrna that is then translated in the cytoplasm.
Term
Exon
Definition
The protein-coding region in the DNA.
Term
Rybozymes
Definition
Found in prokaryotes; are RNA molecules that possess catalyctic activity in the same manner as enzymes composed of protein. Following splicing, an mRNA is ready to leave the nucleus.
Term
Anticodon
Definition
A group of three bases that is complementary to a specific mRNA codon
Term
Wobble hypothesis
Definition
Coined by Francis Crick. He stated that the first two positions in a tRNA anticodon pair obey the A-U/G-C configuration. However, the third position can be variable.
Term
Aminoacyl-tRNA synthetase
Definition
Amino acid-activating enzyme. Attaches the correct amino acid to the correct tRNA molecule.
Term
Polyribosome
Definition
Several ribosomes are often attached to and translating the same mRNA. As soon as the initial portion of the mRNA has been translated by one ribosome, and the ribosome has begun to move down the mRNA, another ribosome attaches to the mRNA. This entire complex is called a polyribosome and greatly increases the efficiency of translation.
Term
Three steps of Translation:
Definition
1) Initiation
2) Elongation
3) Termination
Term
Histone
Definition
Proteins that DNA tightly coils around to form chromosomes.
Term
Nucleosome
Definition
A DNA-histone complex, about 11nm in diameter; each nucleosome contains a 146-nucleotide-long stretch of DNA and eight histine molecules
Term
Euchromatin
Definition
represents the active chromatin containing genes that are being transcribed
Term
Heterochromatin
Definition
condensed DNA
Term
DNA is made of:
Definition
1) Nitrogenous bases (A,C,T,G)
2) Sugar (deoxyribose)
3) Hydrogen bonds
4) Phosphate

Note: Sugar (deoxyribose) and phosphate make up the backbone of DNA
Term
Helicase
Definition
unzips DNA
Term
Polymerase
Definition
adds bases to the DNA molecule
Term
5' end of nucleotides begins with a _________.
Definition
Phosphate
Term
3' end of nucleotides begins with a _______ ________.
Definition
Hydroxyl molecule (OH)
Term
Alleles
Definition
alternative forms of a gene
Term
chromosome
Definition
long strand of DNA associated with proteins
Term
Diploid cell
Definition
contains two sets of chromosomes, with one set inherited from each parent
Term
autosomes
Definition
the chromosomes that are the same for both sexes
Term
sex chromosomes
Definition
determine whether a person is male (XY) or female (XX)
Term
Homologous pair of chromosomes
Definition
the chromosomes look alike and have the same sequence of genes in the same positions
Term
gene's locus
Definition
physical place on the chromosome
Term
meiosis
Definition
specialized form of cell division that occurs in diploid germ cells and gives rise to haploid cells, each containing just one set of chromosomes
Term
true breeding in plants
Definition
self-fertilization always produced offspring identical to the parent plant
Term
dominant allele
Definition
one that exerts its effects whenever it is present
Term
recessive allele
Definition
one whose effect is masked if a dominant allele is also present
Term
genotype
Definition
expresses the genetic makeup of an individual, and it is written as a pair of letters representing the alleles
Term
homozygous gene
Definition
one that has two identical alleles
Term
heterozygous genotype
Definition
has two different alleles for the gene (Yy)
Term
wild-type allele, genotype, or phenotype
Definition
the most common form or expression of a gene in a population
Term
mutant allele, genotype, or phenotype
Definition
a variant that arises when a gene undergoes a mutation
Term
P generation
Definition
("Parental generation") It is the first set of individuals being mated
Term
F1 generation
Definition
first filial ("child") generation; is the offspring from the P generation
Term
F2 Generation
Definition
offspring on the F1 plants
Term
monohybrid cross
Definition
mating between two individuals that are both heterozygous for the same gene
Term
Punnett Square
Definition
uses the genotypes of the parents to reveal which allele combinations the offspring may inherit
Term
Test cross
Definition
mating between an individual of unknown genotype and a homozygous recessive individual
Term
law of segregation
Definition
states that the two alleles of each gene are packaged into separate gametes; that is, they "segregate," or move apart from each other, during gamete formation.
Term
dihybrid cross
Definition
a mating between two individuals that are each heterozygous for two genes
Term
Law of independent assortment
Definition
states that during gamete formation, the segregation of alleles for one gene does not influence the alleles for another gene (provided the genes are on separate chromosomes). That is, alleles for two different genes are randomly packaged into gametes with respect to each other.
Term
Product rule of genetics
Definition
states that the chance that two independent events will both occur (for example, an offspring inheriting specific alleles for two genes) equals the product of the individual chances that each event will occur. (The product rule can predict the chance of obtaining wrinkled, green seeds (rr yy) from dihybrid (Rr Yy) parents).
Term
Linked genes
Definition
carried on the same chromosome; they are therefore inherited together
Term
linkage groups
Definition
collections of genes that tend to be inherited together
Term
crossing over
Definition
an exchange of genetic material between homologous chromosomes during prophase I. After crossing over, no two chromatids in a homologous pair of chromosomes are identical.
Term
Parental Chromatid
Definition
retains the allele combination from each parent
Term
Recombinant chromatid
Definition
Whenever crossing over happens between two genes, some of the offspring inherit a recombinant chromatid with a mix of maternal (mother) and paternal (father) alleles.
Term
Linkage maps
Definition
diagrams of gene order and spacing on chromosomes
Term
incomplete dominance
Definition
the heterozygote has a third phenotype that is intermediate between those of the two homozygotes
Term
Codominance
Definition
two different alleles are expressed together in the same phenotype
Term
pleiotropy
Definition
one gene has multiple effects on the phenotype
Term
epistasis
Definition
occurs when one gene's product affects the expression of another gene (ex. male pattern baldness, a genetic condition, is associated with gradual hair loss, which hides the effects of the allele for a "widow's peak" hairline)
Term
y-linked disorders
Definition
there are very few y-linked disorders; most involve defects in sperm production
Term
x-linked disorders
Definition
most human sex-linked traits are therefore x-linked; that is, they are controlled by genes on the X chromosome.
Term
X-Inactivation
Definition
a cell shuts off all but one X chromosome in each cell; this process happens early int he embryonic development of a mammal; x inactivation is directly observable because a turned off X chromosome absorbs a stain much more readily than an active X chromosome does.
Term
Autosomal dominant disorder
Definition
expressed in heterozygotes and therefore typically appears in every generation; because the allele is dominant and located on an autosome, one of both of the affected individual's parents must also have the disorder (unless the disease-causing allele arose by a new mutation)
Term
Autosomal recessive disorder
Definition
requires that a person receive the disease-causing allele from both parents; each parent must therefore have at least one copy of the allele, either because they are homozygous recessive and have the disease or because they are heterozygotes ("carriers"); if both parents are carriers, autosomal recessive conditions may seem to disappear in one generation, only to reappear in the next.
Term
Pedigree chart
Definition
depicts family relationships and phenotypes; useful for determining the mode of inheritance (square indicate males and circles denote females)
Term
Polygenic
Definition
most inherited traits are polygenic; that is, the phenotype reflects the activities of more than one gene (ex. male pattern baldness)
Term
AUG codon
Definition
start codon (Methionine)
Term
Where are codons found?
Definition
mRNA
Term
Gene
Definition
a stretch of DNA that codes for a specific product
Term
Somatic cells
Definition
cells of the body (tissue cells, liver cells, spleen cells, red blood cells, etc.)
Term
Germ cells
Definition
give rise to gametes (haploid)
Term
Point mutation
Definition
Three types: insertion, deletion, and substitution. Can result in: amino acid substitution, silent mutation, premature stop, and a frame shift.
Term
Mutagen
Definition
anything in the environment that causes mutations
Term
Hemoglobin
Definition
carries oxygen in the circulatory system; made up of 2 alpha chains and 2 beta chains; the "heme group" in a hemoglobin molecule is what carries oxygen (it contains iron on it)
Term
Stages of Mitosis
Definition
1) replication
2) chromosomes line up in middle of cell
3)Once lined up, the chromosomes will split and go to either sides
4) 2 identical cells are created
Term
Stages of Meiosis
Definition
1) Replication: the two homologous chromosomes synapse and then move to the center
2) The synapsed chromosomes line up in the middle of the cell (crossing over happens here)
3) The synapsed chromosomes break apart and move to opposite sides of the cell
4) 4 new cells with 3 chromosomes in each are created
Term
Centromere
Definition
joins together chromatids
Term
Telomere
Definition
caps off the ends of chromatids
Term
genetic locus
Definition
location
Term
SRY gene
Definition
causes embryos to develop as males (people can be SRY+ or -)
Term
Chromatid
Definition
2 chromatids make up a chromosome
Term
population
Definition
members of a single species occupying a particular area at the same time
Term
population genetics
Definition
studies the diversity in terms of allele differences
Term
single nucleotide polymorphisms (SNPs)
Definition
DNA sequences in a species' genome that differ by a single nucleotide
Term
Microevolution
Definition
pertains to evolutionary changes within a population
Term
gene pool
Definition
various alleles at all the gene loci in all individuals make up the gene pool of the population
Term
Hardy-Weinberg Principle
Definition
States that an equilibrium of gene pool frequencies will remain in effect in each succeeding generation of a sexually reproducing population as long as five conditions are met:
1) no mutatins
2) no gene flow
3) random mating
4) no genetic drift
5) no selection
Term
Industrial melanism
Definition
refers to a darkening of moths once industrialization has begun in a country
Term
Mutations
Definition
permanent genetic changes; the raw material for evolutionary change
Term
nonrandom mating
Definition
occurs when certain genotypes or phenotypes mate with one another
Term
assortative mating
Definition
a type of nonrandom mating that occurs when individuals tend to mate with those having the same phenotype with respect to a certain characteristic.
Term
gene flow
Definition
also called gene migration; the movement of alleles between populations
Term
genetic drift
Definition
refers to changes in the allele frequencies of a gene pool due to chance rather than selection by the environment
Term
Bottleneck effect
Definition
When a species is subjected to near extinction because of a natural disaster or because of overhunting, overharvesting, ad habitat
Term
Founder effect
Definition
an example of genetic drift in which rare alleles, or combinations of alleles, occur at a higher frequency in a population isolated from the general population
Term
stabilizing selection
Definition
occurs when an intermediate phenotype can improve the adaptation of the population to those aspects of the environment that remain constant. Extreme phenotypes are selected against, and the intermediate phenotype is favored.
Term
Directional selection
Definition
occurs when the extreme phenotype is favored, and the distribution curve shifts in that direction
Term
sexual selection
Definition
refers to adaptive changes in males and females that lead to an increased ability to secure a mate
Term
fitness
Definition
the ability to produce surviving offspring
Term
cost-benefit analyses
Definition
have been done to determine if the benefit of access to mating is worth the cost of competition among males
Term
dominance hierarchy
Definition
a higher-ranking animal has greater access to resources than a lower-ranking animal
Term
territory
Definition
an area that is defended against competitors
Term
territoriality
Definition
includes the type of defensive behavior needed to defend a territory (baboons travel within a home range, foraging for food each day and sleeping in trees at night)
Term
natural selection
Definition
A process in nature in which organisms possessing certain genotypic characteristics that make them better adjusted to an environment tend to survive, reproduce, increase in number or frequency, and therefore, are able to transmit and perpetuate their essential genotypic qualities to succeeding generations.
Term
heterozygote advantage
Definition
occurs when the heterozygote is favored over the two homozygotes; in this way, heterozygote advantage assists the maintenance of genetic, and therefore phenotypic, diversity in future generations
Term
Sickle Cell Anemia
Definition
Condition that is due to an abnormal form of hemoglobin, the molecule that carries oxygen in red blood cells. Recessive allele for Sickle Cell Anemia is more prevalent in areas where malaria is also prevalent.
Term
Cystic Fibrosis
Definition
Recessive condition that causes lung infections and digestive difficulties.
Term
What is necessary for a trait to be under natural selection?
Definition
1) It has to be inherited
2) The trait must cause differences in fitness
3) There has to be variation in the trait
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