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Bio 123 Lecture 4-5
Viral Diseases
66
Biology
Undergraduate 1
01/24/2013

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Term
where can viral diseases only reproduce?
Definition
within the host cell
Term
what do viral diseases consist of?
Definition
genome + capsule
Term

true or false

viruses lack metabolic enzymes like ribosomes and shit?

Definition
true dat, they use host cell machinery thats why they can only reproduce inside the host
Term
in the interest of the virus not to cause death of its host what does a virus need to be able to do?
Definition
have a long latency period OR have easy transmission
Term
who can the influenza virus affect?
Definition
humans, birds, pigs, horses, seals
Term
which part of the body does influenza virus affect?
Definition
upper respiratory tract and major central airways
Term
what are pandemics?
Definition
Worldwide epidemics - new strains and little immunity
Term
swine flu is known as H1N1 strain. When did this strain previously occur in history and what was it called?
Definition

occured in 1918 and it was called the spanish flu

(20-50 million people dead)

Term
1957-58. which strain of flu was this and what was it called?
Definition
H2N2 and it was called Asian flu
Term
1968-69 which influenza strain occured?
Definition
H3N2 AKA hong kong flu
Term
2009 which strain of influenza re-emerged?
Definition
H1N1 Swine Flu
Term
which subtype of influenza causes pandemics?
Definition
type A
Term
which subtypes of influenza affects humas only?
Definition
Type B and C
Term
which influenza subtype is a mild human illness?
Definition
Type C
Term
what shape and diameter is the influenza?
Definition
ovoid/spherical 90-100nm
Term
what kind of genome does the influenza virus contain
Definition
ssRNA
Term
how many strands of ssRNA does the influenza virus contain?
Definition
8
Term
what does the H and the N stand for in H1N1?
Definition

HA =Heamagluttinin

NA = Neuraminidase

 

Term
the outer envelope of influenza is made form Lipid bilayer. where is this derived from?
Definition
the plasmamembrane of the infected host cell
Term
where does HA bind to?
Definition
Sialic Acid in the upper respiratory tract
Term
how many types of heamagluttinin are there in type A influenza?
Definition
16 in class A
Term
how many types of NA (neuraminidase) are there in type A influenza?
Definition
9 types 
Term
what does neuraminidase help to do?
Definition
helps viral budding from host cell
Term
what does the nucleocapsid of the influenza virus contain?
Definition
8 different single strands of RNA (ssRNA) + protein + RNA polymerase
Term
influenza genome replicates inside the host for 2 functions what are they?
Definition
one template of rna is used to make mRNA which orders the synthesis of glycoproteins and capsid proteins and another strand of RNA is used to make more copy of genome (ssRNA)
Term
what happens when the influenza virus approaches a host cell?
Definition
HA from virus binds to Sialic acid and host cell and capsid + genome enter the cell
Term
what are natural killer cells?
Definition
they are a type of white blood cells involved in the NON-SPECIFIC killing of virus infected cells. they do not attact to epitopes or anything like that
Term
which part of the immune response are natural killer cells associated with?
Definition
the innate immune response
Term
innate immune response involves the induction of interferons. what are they?
Definition
they are chemicals made by infected cells and macrophages and lead to degradation of viral RNA eg, IFN-alpha; IFN-beta
Term
what are the 2 responses to viral infection?
Definition
innate and acquired
Term
in aquired immunity what do B cells protect against?
Definition
pathogens and toxins in extra celluar fluid
Term
in aquired immunity what do tc cells defend against?
Definition
infected cells, cancer cells and transplanted cells
Term
in the influenza virus how are new infectious strains made?
Definition
constant alterations of HA and NA
Term
what is the main antigenic feature of influenza?
Definition
Haemagglutinin
Term
what is the function of the binding cleft?
Definition
bind sialic acid on host cell
Term

characteristics of antigenic DRIFT (4)

 

Definition
  • minor changes in protein structure
  • Epidemics
  • cause: lack of viral rna polymerase proofreading. Point mutations
  • occurs in influenza A,B and C
Term
what is antigenic shift?
Definition
  • the sudden emergence of a new antigenic subtype
  •  HA/NA are very altered.
  • Only happens in Influenza A 
  • causes pandemics
Term
what causes antigenic Shift?
Definition
2 different strains of (human/animal) influenza infect the same cell. RNA from each exposed and mixed up. eg. H3N2 and H5N1 infect cell. cell could produce new H3N1. No immunity.
Term
when did HIV emerge?
Definition
1981
Term
what are symptoms associated with HIV?
Definition

Pneumonia

Kaposi's sarcoma

Reduced levels of CD4+ Helper T cells

Term
what is the clinical term for the final stage manifestations of HIV infection?
Definition
AIDS
Term
how to diagnose HIV?
Definition

Seroconversion - presence of antibodies to HIV (present within a few months, usually 3)

RNA testing - looking for viral dna itself. blood test and takes shorter than seroconversion but less commonly used.

reduced cd4 t-cell count

Term
with a CD4 T helper cell count at less than 200 p/ul what would it be a strong indication of?
Definition

AIDS

normal ranfe approximatley 500-1100 /ul

Term
what type of virus is HIV?
Definition
a retrovirus
Term
name 3 enzymes present in HIV virion
Definition

protease

intergrase

reverse transcriptase

Term
how many receptors does HIV have? what are their names and positions?
Definition

there are 2 receptors

they form an ice cream cone and icecream.

the gp41 is the icecream cone (bottom)

the gp120 is the icecream on top

Term
what is needed for the hiv virus to attach to the host cell?
Definition
its receptors gp120 and gp41..also needs CCR5/CXCR4 on host cell in order to enter cell.
Term
how many strands of genetic information contain in HIV?
Definition
2 strands of ssRNA
Term

t of false

 

HIV has a long latency period?

Definition
true and after this long latency period it can undergo rapid mutation
Term
hiv is a retrovirus what does this mean?
Definition
it uses reverse transcriptase to synthesis double stranded DNA
Term
what happens if a cell have no co receptor like CCR5 or CXCR4?
Definition
then HIV cannot enter the cell. this is a requirement for the virus to penetrate the cell
Term
what happens to the RNA template after dsDNA has been synthesised?
Definition
it is degraded
Term
in HIV for the dsDNA to be intergrated into the host genome which enzyme is needed?
Definition
integrase
Term
what is the dsDNA used to make?
Definition
more of ssRNA for the virus that will bud off and infect other cells.
Term
in the acute phase of hiv infection there are high levels of virus in your blood. this causes a ...... in CD4 T helper cells
Definition
drop
Term
is the number of CD4 Thelper cells recovered?
Definition
yes as antibodies to virus are generated the Tc cells kill infected cells and CD4 T helper cells are recovered.
Term
what happens to the level of HIV in the blood in chronic phase?
Definition
HIV levels have fallen in the blood BUT continue to be made in the lymph nodes.
Term
what does the continous reproduction of HIV in lymph nodes do?
Definition
causes damge to lymphatic tissue.
Term
why does the depletion of CD4 T helper cells lead to extensive loss of humoral and cell mediated response?
Definition
T helper cells are needed to fully activate B cells and Tc cells.
Term
why can the immune system not win HIV? (4)
Definition
  •  high mutation rate as reverse transcriptase cannot proofread
  • Helper T Cell depleted (needed for humoral and cell mediated response)
  • breakdown of lymphatic tissue
  • proviral form can hide from the immune system
Term
treatments like AZT can inhibit proviral cDNA formation. But like bacteria and antibiotics what happens?
Definition
resistant viral forms are produced
Term
how does a rescriptor work?
Definition
by inhibiting the reverse transcriptase enzyme
Term
how does indinavir and crixidan work?
Definition
they inhibit viral protease
Term
other ways HIV therapeutics work are by inhibiting intergrase needed to incorporate the DNA into host genome and?
Definition
inhibiting fusion of virus and cell
Term
what is HAART?
Definition

combination therapy -

highly active anti retroviral therapy

Term
why cant a vaccine be developed?
Definition
  • most vaccines prevent disease, not infection
  • would a live-attenuated virus of HIV be safe?
  • genital tract route of infection is unusual - will a vaccine work?
  • testing on animals/primates ethical issues
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