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BIO 1107 Chap 14
Molecular Inheritance and DNA Replication
45
Biology
Undergraduate 1
12/02/2024

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Cards

Term
True or false: genes have physical locations on chromosomes
Definition
true
Term
What does the Chromosome Theory state
Definition

that chromosomes are the basic genetic inheritance

- genes are on chromosomes and the movement of chromosomes during Meiosis provides the mechanism of inheritance of genes in gamete observed by Mendel

Term
Who discovered that the genetic material was on DNA
Definition
Hershey and Chase
Term
How did Hershey and Chase discover the genetic material was on DNA
Definition
They studied bacteriophage, and when the phage infected the E. Coli bacterium, only the DNA would it.
Term
How does DNA store massive amounts of information
Definition
its all in a sequence, not the length of it
Term
How many letters are in the nucleotide language and what are they?
Definition
4 letters, A, T G, C
Term
What is Chargaff's Rule
Definition

- That A is paired with T, and that G is paired with C

- he also discovered the number of A had no effect on the G or C concentration and vice versa

Term
How did Chargaff discover what he did
Definition
using chromatography
Term
Who has Rosalind Franklin
Definition
she was an x-ray crystallographer, and she gave us the first x-ray image of DNA
Term
What did Franklin discover
Definition
  1. the molecule was double stranded
  2. The molecules was helical in nature
  3. The molecule was uniform in diameter all the way down
Term
Who were Watson and Crick
Definition

the guys that got a Nobel prize for Franklins discovery

because she had passed and they stole her work

Term
What did Watson and Crick deduce fromFranklin's work
Definition
  • the DNA was a double helix with two strands wrapping around each other
  • the nucleotide bases were arranged so that they were on the inside of the molecule and the phosphate sugars were as a backbone on the outside
Term
Each DNA turn is which way in nature
Definition
right- handed
Term
What holds the two strands together
Definition
hydrongen bonds between the nucleotides
Term
How many hydrogen bonds form between G's and C's
Definition
three
Term
How many hydrogen bonds form between A's and T's
Definition
two
Term
What is complimentary base pairing
Definition
a's goes with t and G's goes with C
Term
Why is DNA 'antiparallel' in natures
Definition
because one molecule has a 5' side of the sugar overhanging the end, the opposite facing stand has the 3' of the sugar overhanging
Term
What is a DNA stand made of
Definition
linked nucleotides
Term
What is a nucleotide consist of
Definition
  • a phosphate group
  • sugar ring
  • a nitrogen base
Term
What are the 4 nitrogen bases
Definition
  1. Adenine
  2. Guanine
  3. Thymine
  4. Cytosine
Term
How do the phosphodiester bond between nucleotides form?
Definition
the phosphodiester bond is made between the O of oa phosphate group of one nucleotide and C 3 on the sugae ring of the next nucleotide and the nitrogen base sticks out
Term
Whay do we say the DNA backbone is alternating
Definition
alternates sugar, phosphate, suagr, phosphate
Term
How are the Carbons numbered
Definition
in the nucleotides, there is an oxygen in the ring, going clockwise the carbons are numbered sequentially 1-5 with the 5' C sticking up out of the ring
Term
What does the 5' and 3' end mean
Definition
the 5' C and the 3' C have nothing bound to it
Term
How do tou grow a nucleotide chain
Definition

by addinf to the 3' hydroxyl group

- A phosphodiester bond is formed between the 5' phosphate of the new nucleotide and the 3' hydroxyl of the "old" nucleotide

Term

 

What are the 7 issues that pop up during replication that have to be resolved

Definition
  1. Unwinding of the helix
  2. reduce increased coiling that builds up when you unwind
  3. Synthesize primers for initiation of replicating
  4. discontinuous replication of one strand
  5. Removal of the primers at the end
  6. joining of the gaps made by primer removal
  7. proof reading
Term
What are Origin of Repilcation
Definition

defined sequence where replication will start

 

Term
Why does the origin of replication sequence have a lot of A's and T's
Definition
because it is easy to open there
Term
How many origins of replication do prokaryotes have? Eukaryote?
Definition

pro- have 1

euk- have many

Term
What is Topoisomerase
Definition
  • an enzyme that can induce supercoiling and also can relieve it
  • as the strands are pulled apart, it induces supercoiling and torsion ahead of the replication form, so the topoisomerase moves ahead and relieves the replication fork
Term
What is Helicase
Definition
this enzyme wedges in between the two strands breaking hydrogen bonds and separating the two strands
Term
What is Single Stranded Binding Protein
Definition
a protein that coats the single strands of DNA ahead of the polymerase to keep it stable
Term
What is DNA polymerase III
Definition
  • responsible for adding new nucleotides onto the growing chain- 5'-3' polymerization
  • "proofreading" where it can go backwards and chew off a portion of what it just replication- 3'-5' exonuclease
Term

What is DNA polymerase I:

 

Definition
  • responsible for filling gaps
  • has 5'-3' polymerization and the 3'-5' exonuclease activities, so it can replicate and proofread
  • but it can also remove nucleotides in front of it so that it can chew the same direction it is moving
Term
What is primase
Definition
  • lays down RNA primers
  • it is a type of RNA polymerase that is happy using a single stranded template- since DNA polymerase is not
  • it acts after the single stranded binding protein binds but before the DNA polymerase can do its thing
  • the primers are removed by the 5'-3' exonuclease activity of polymerase I
Term
What is DNA ligase
Definition
  • it seals the break so that you have one continuous piece if DNA
Term
Order of operation for DNA replication
Definition
  1. open up DNA strand
  2. sitting ahead of replication form is topoisomerase so it can relieve supercoiling
  3. helicase wedges into the fork, breaks hydrogen and opens up the strands
  4. the single stranded binding proteins comes in a coats the single strands- stabilizing them
  5. primase adds the RNA primers to the single strands so that there is a double stranded template
  6. DNA polymerase III loads and replicates in the 5'-3' direction, adding nucleotides onto the 3' end
  7. DNA polymerase I loads and chew away the RNA primer and synthesizes new DNA in its wake
  8. DNA ligase seals the ends of the DNA strands
Term
What is the Leading strand
Definition
the 3' end is constantly available and the polymerase freely moves behind the helicase synthesizing the DNA in one nice continuous strand
Term
What is the Lagging strand
Definition
  • the 3' side is restricted by proximity to the helicase
  • so there is discontinuous hopping where the DNA polymerase moves away from the helicase until it reaches the 5' end of the segment replicated before it
  • - creates Okazaki fragments
Term
What are two DNA repair pathwasy
Definition
  1. Mismatch repair- removes a single nucleotide to fiz a single problem
  2. Nucleotide Excision- removes a large segment of the DNA to be re-replicated
Term
What are telomeres
Definition
sequences that are replicated many, many times so that you have a spot to get shorter and shorter each time you ar only losing telomere length
Term
What makes telomeres
Definition
telomerase
Term
when is telomerase active
Definition
only during fetal development so you are born with what you got
Term
What is the central dogma of biology
Definition
information is stored in DNA, transcribed to RNA, and translated to protein
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