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Bio 101 Test 1
elementary chemestry, organic molecules, cell structure & membranes
137
Biology
Undergraduate 1
11/23/2011

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Term
evolution
Definition
the process of change to the diversity of organisms
Term
biology
Definition
scientific study of life
Term
emergent properties
Definition
properties that are not present at the preceding level
Term
systems biology
Definition
an approach that attempts to model the dynamic behavior of whole biological systems based on a study of the interactions among the system's parts
Term

what are the 10 levels of biological organization

(largest to smallest)

Definition
biosphere, ecosystems, communities, populations, organisms, organs and organ systems, tissues, cells, organelles, molecules
Term
eukaryotic cell
Definition
subdivided by internal membranes into various membrane-eclosed organelles
Term
prokaryotic cell
Definition
simpler than eukaryotic cells, DNA is not seperated from the rest of the cell by enclosure in a membrane-bounded nucleus
Term
What is DNA?
Definition
deoxyribonucleic acid
Term
gene
Definition
units of inheritance that transmit information from parents to offspring
Term
gene expression
Definition
process by which the info in a gene directs the production of a cellular product
Term
Genome
Definition
genetic instructions that an organism inherits
Term
negative feedback
Definition
the output or product of a process regulates. in which accumulation of an end product of a process slows that process
Term
positive feedback
Definition
an end product speeds up its own production
Term
What are the 3 domains of organisms?
Definition
bacteria, archaea, eukarya
Term
what domains (2) are prokaryotic?
Definition
Bacteria and Archaea
Term
evolutionary adaptation theorized by Charles Darwin
Definition
natural selection
Term
science
Definition
an approach to understanding the natural world
Term
inquiry
Definition
search for information and explanation
Term
data
Definition
recorded observations
Term
hypothesis
Definition
a tentative answer to a well-framed question
Term
deductive reasoning
Definition
generally used after the hypothesis has been developed and involves logic that flows in the opposite direction, from general to specific
Term
technology
Definition
applies scientific knowledge for some specific purpose
Term
element
Definition
a substance that cannot be broken down to tother substances by chemical reactions
Term
compound
Definition
a substance consisting of 2 or more different elements combined in a fixed ratio
Term
atom
Definition
the smallest unit of matter that still retains the properties of an element
Term
proton
Definition
positive charged particle in a nucleus
Term
neutron
Definition
neutral charged particle in a nucleus
Term
electron
Definition
negative charged particle in a nucleus
Term
atomic nucleus
Definition
center of an atom
Term
dalton
Definition
unit of measurement to measure the mass of protons and neutrons
Term
atomic number
Definition
# of protons in a nucleus
Term
mass number
Definition

sum of protons plus neutrons found in the nucleus of an atom

 

Term
atomic mass
Definition
approximation of total mass of an atom
Term
isotopes
Definition
atoms of an element that have more neutrons than other atoms of the same element
Term
radioactive isotope
Definition
one in which the nucleus decays spontaneously, giving off particles and energy
Term
energy
Definition
capacity to cause change
Term
potential energy
Definition
energy that matter possesses bc of its location or structure
Term
valence electrons
Definition
outermost electrons
Term
valence shell
Definition
outermost shell
Term
orbital
Definition
3-D space where an electron is found 90% of the time
Term
What are the strongest types of chemical bonds?
Definition
covalent and ionic bonds
Term
molecule
Definition
2 or more atoms held together by covalent bonds
Term
single bond
Definition
single pair of shaired electrons
Term
valence
Definition
the bonding compacity of unpaired electrons
Term
electronegativity
Definition
the attraction of a particular atom for the electrons of a covalent bond
Term
non-polar covalent bond
Definition
electrons shared equally bc the atoms have the same electronegativity
Term
polar covalent bond
Definition
electrons are not equally shared or one atom has more electronegativity than the other
Term
ion
Definition
charged atom
Term
cation
Definition
positively charged ion
Term
anion
Definition
negatively charged ion
Term
ionic bond
Definition
the attraction caused by a cation and an anion
Term

ionic compounds or salts

 

Definition
compounds formed by ionic bonds
Term
hydrogen bond
Definition
noncovalent attraction btwn a hydrogen and an electronegative atom
Term
chemical equilibrium
Definition
point at which reactions offset one another one another exactly
Term
polar covalent bonds
Definition
unequal sharing of electrons
Term
adhesion
Definition
the clinging of one substance to another
Term
surface tension
Definition
measure of how difficult it is to stretch or break the surface of a liquid
Term
kinetic energy
Definition
energy of motion
Term
heat
Definition
form of kinetic energy
Term
temperature
Definition

a measure of heat intesity that represents the average kinetic energy of the molecules, regardless of volume

 

Term
calorie
Definition
amount of heat it takes to raise the temperature of 1 gram of water by 1 degree Celcius
Term
joule
Definition
energy unit
Term
Definition
amount of heat that must be absorbed or lost for 1 gram of that substance to change its temperature by 1 degree Celcius
Term
heat of vaporization
Definition
the quantity of heat a liquid must absorb for 1 gram of it to be converted from the liquid to the gaseous state
Term
evaporative cooling
Definition
occurs bc the molecules witht eh greatest kinetic energy are the most likely to leave as gas
Term
solution
Definition
a liquid that is completely homogenous mixture of 2 or more substances
Term
solvent
Definition
dissolving agent of a solution
Term
solute
Definition
substance that is dissolved
Term
aqueous solution
Definition
is one in which water is the solvent
Term
hydration shell
Definition
the sphere of water molecules around each dissolved ion
Term
hydrophilic
Definition
any substance that has an affinity to water
Term
colloid
Definition
stable suspension of fine particules in a liquid
Term
hydrophobic
Definition
substances that are nonionic and nonpolar actually seem to repel water
Term
molecular mass
Definition
sum of the masses of all the atoms in a molecule
Term
molarity
Definition
# of moles of solute per liter of solution
Term
hydrogen ion
Definition
a single proton with a + charge
Term
hydroxide ion
Definition
water molecule that lost a proton which has a negative 1 charge (OH-)
Term
hydronium ion
Definition
the proton binds to the other water molecule making that molecule (H3O+)
Term
acid
Definition
is a substance that increases the hydrogen ion concentration of a solution
Term
base
Definition
a substancer that reduces the hydrogen ion concentration of a solution
Term
pH
Definition
negative logarithm of the hydrogen ion concetration
Term
buffer
Definition
substance that minimizes changes in the concentration of H+ and OH- in a solution
Term
organic chemistry
Definition
study of carbon compounds
Term
hydrogen carbon
Definition
organic molecules consisting of only carbon and hydrogen
Term
isomers
Definition
compounds that have the same number of atoms of the same element but different structures and hints different properties
Term
structural isomers
Definition
differ in the covalent arrangements of their atoms
Term
cis-trans isomers
Definition
carbons have covalent bonds to the same atoms but these atoms differ in their spacial arrangements due to the inflexibility of double bonds
Term
enantiomers
Definition
are isomers that are mirror images of each other and that differ in shape due the presence of an asymmetric carbon one that is attached to 4 different atoms or groups of atoms
Term
functional groups
Definition
chemical groups affect molecular function by being directly involved in chemical reactions
Term
ATP
Definition
consists of an organic molecule called adenosine attaqched to a string of 3 phosphate groups
Term
what are 3 main macromolecules?
Definition
carbohydrates, proteins, nucleic acids
Term
polymer
Definition
long molecule consistings of many similar or identical building blocks linked by covalent bonds
Term
monomers
Definition
building blocks of polymers
Term
enzymes
Definition
specialized macromolecules that speed up chemical reactions
Term
dehydration reaction
Definition
monomers are connecting by a reaction in which 2 molecules are covalently bounded to each other with the loss of a water molecule
Term
hydrolisis
Definition
a process that is essentially the reverse of the dehydration reaction
Term
carbohydrates
Definition
includes both sugars and polymers of sugars
Term
monosaccharide
Definition
simple sugar
Term
disaccharide
Definition
consists of 2 monosaccharide joined by a glycosidic linkage,(a covalent bond formed btwn 2 monosaccharides by dehydration reaction)
Term
polysaccharides
Definition
are macromolecules polymers with a few hundred-few thousand monosaccharides joined by glycosidic linkages
Term
starch
Definition
a polymer of glucaose monomers as granuoles within cellular structures known as plastids
Term
glycogen
Definition
a ploymer of glucose that is like amylopectin but more extensively branched
Term
cellulose
Definition
major component of the tough walls that enclose plant cells
Term
chitin
Definition
classified as a strucutural polysaccharide, carbohydrate used by orthropods to build their exoskeletons
Term
lipids
Definition
any of a group of large biological molecules including fats, phospholipids, and steroids that mix poorly if at all with water
Term
fat
Definition
is constructed from 2 kinds of smaller molecules: glycerol and fatty acids
Term
fatty acid
Definition
has a long carbon skeleton usually 16 or 18 carbon atoms in length, carbon at 1 end of the skeleton is part of a carboxyl group
Term
triglycerol
Definition
consists of 3 fatty acids linked to 1 glycerol molecule
Term
saturated fatty acids
Definition
if there are no double bonds btwn carbon atoms composing a chain then as many hydrogen atoms as possible are bonded to the carbon skeleton such a structure is said to be saturated with hydrogen and the resulting fatty acids
Term
unsaturated fatty acids
Definition
has 1 or more double bonds with 1 fewer hydrogen atom on each double bonded carbon, nearly all double bonds in naturally occurring fatty acids are cis double bonds which cause a kink in the hydrocarbon chain wherever they occur
Term
trans fats
Definition
an unsaturated fat formed artificially during hydrogenation of oils containing 1 or more trans double bonds
Term
lipid-phospholipids
Definition
essential for cells bc they make up cell membranes, their structure provides a classic ex. of how form fits function at the molecular level
Term
steroids
Definition
are lipids characterized by a carbon skeleton consisting of 4 fused rings
Term
cholesterol
Definition
crucial molecule in animals, it is a common component of animal cell membranes and is also the precursor from which other steroids are synthesized
Term
catalyst
Definition
chemical agents that selectively speed up chemical reactions without being consumed by the reaction
Term
what protein regualtes metabolism by acting as a catylst?
Definition
enzymatic protein
Term
polypetides
Definition
polymers of amino acids
Term
protein
Definition
is a biloogically functional molecule that consists of 1 or more polypeptides each folded and coiled into a specific 3-D structure
Term
amino acid
Definition
is an organic molecule possessing both an amino group and carboxyl group
Term
look at figure 5-15 and 5-16 protein functions
Definition
pg778
Term
peptide bonds
Definition
when 2 amino acids are positioned so that the carboxyl group of 1 is adjacent to the amino group of the other, they can become joined by a dehydration reaction with the removal of a water molecule the resulting covalent bond
Term
denaturation
Definition
if the pH, salt concentration, temp, or other aspects of its environment are altered the weak chemical bonds and interactions within a protein may be desroyed casuing the protein to unravel and lose its native shape
Term
chaperonins
Definition
proein molecules that assist in the proper folding of other proteins
Term
x-ray crystalography
Definition
used to determine the 3-D structure of many other proteins
Term
gene
Definition
the amino acid sequences of a polypeptide is programmed by a descrete unit of inheritence
Term
nucleic acid
Definition
are polymers made of monomers called nucleotides
Term
what are 2 types of nucleic acids?
Definition
deoxribonucleic acid (DNA), ribonucleic acid (RNA)
Term
polynucleotides
Definition
nucleic acids are macromolecules that exist as polymers
Term
nucleotides
Definition
monomer that makes up polynucleotides
Term
pyrimidine
Definition
1 six membered ring of carbon and nitrogen atoms
Term
what are the members of the pyrimidine family?
Definition
cytosine, thymine, uracil
Term
purines
Definition
are larger with a 6 membered ring fused to a 5 membered ring
Term
what are the 2 types of purines?
Definition
adenine and guanine
Term
deoxyribose
Definition
sugar in DNA
Term
ribose
Definition
sugar in RNA
Term
double helix
Definition
DNA molecules have 2 polynucleotides or strands that spiral around and imaginary axis
Term
antiparallele
Definition
the 2 sugar phosphate backbones run in opposite 5>3 directions from each other
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