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BILD1
Basic Biology focusing on the cell
42
Biology
Undergraduate 1
01/17/2013

Additional Biology Flashcards

 


 

Cards

Term
Emergent Properties
Definition
Characterists which result from the arrangement and interraction of parts as system complexity increases.
Term
Systems Biology
Definition
An approach that attempts to model the dynamic behavior of whole biological systems based on a study of the interractions among the system's parts.
Term
Negative Feedback
Definition
Accumulation of the end product of a process slows that process
Term
4 important propeties of water
Definition

1. Cohesive

2.High specific heat capacity

3.Importnat solvent

4.Frozen water is less dense

Term
4 ways that a Carbon skeleton can vary
Definition

1.Length

2.Branching

3.Double bond position

4.Presence of rings

Term

Hydroxyl Group:

  • structure
  • name of compound
  • Example
  • Functional properties
Definition

1. -OH

2.Alcohols

3.Ethanol

4.Polar, can form H bonds to help dissolve molecules

Term
Isomers
Definition
Compounds that have the same numbers of atoms of the same elements but different structures and hence different properties
Term
3 types of Isomers
Definition

1.Structural: differ in covalent arrangement of atoms

 

2.Cis-trans: differ in arrangement about a rotation restrictive double bond

 

3.Enantiomers: Two isomers which are mirror images of each other. Shape differs around an asymetric (polar) carbon

 

Term

Carbonyl Group:

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

1. >C=O

 

2. Ketones- If group is within the Carbon skeleton

Aldhydes- If group is at the end of the C skeleton

 

3. Acetone (simplest ketone)

Propanal (an aldehyde)

 

4. Ketones & aldehydes may be structual isomers

Found in sugars, giving rise to two main groups of sugars: ketoses and aldehydes

Term

Carboxyl Group:

 

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

1. -C=O

    \

      OH

 

2. Carboxylic acids

 

3.Acetic acid

 

4.Acts as an acid (donates H+)

 

Term

Amino Group:

 

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

        H

      /

1. -N

        \

          H

 

2. Amines

 

3. Amino group + Carboxyl Group = Amino acids

 

4. Acts as a base

Term

Sulfhydryl Group:

 

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

1. -SH

 

2.Thiols

 

3.Cystine

 

4. Two sulfhydryl groups can react by "cross-linking" which helps stabalize protein

 

Term

Phosphate Group:

 

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

        O

        ||

 1.    -O-P-O

        |

        O

 

2. Organic Phosphates

 

3. Glycerol Phospate

 

4. Contributes negative charge to molecule

Reactive with water

Term

Methyl Group:

 

1. Structure

2. Name of compound

3. Example

4. Functional properties

Definition

   H

   |

   1.C-H

   |

   H

 

2.Methylated compunds

 

3. 5-Methyl cytidine

 

4.Affects expression of genes

Unreactive, but contributes to shape

Term

monomers form polymers by __________ reactions

 

Polymers are disassembled by _________

Definition

dehydration

 

hydrolysis

Term

Carbohydates serve as ________ and ________ material.

 

Carbohydrates are ______ and their polymers.

Definition

fuel, building

 

sugars

Term
Cellulose
Definition
Polymer of glucose, but with different glycosidic linkages than startch. A major component of plant cell walls.
Term
Monosaccharides
Definition

Uses: fuel, used in metabolism, used to make polymers and othe rorganic molecules

 

General formula: (CH2O)n

 

Most names end in -ose

Term
Disaccharaides
Definition
Fromed by two monosaccharides by glycosidic linkages
Term
Polysaccharides
Definition
Polymers of sugars which serve food storage and structural roles
Term

Glucose is stored as _______ in animals and ______ in plants.

Definition
glycogen, starch
Term

Lipids:

 

-Traits

-Structure

-Function

-Types

Definition

Hydrophobic biological molecules not made from polymers.

 

Structures dominated by nonpolar covalent bonds (C-C and C-H).

 

Function in metabolism, cell membrane structure, and some are important signaling molecules

 

Include triacylglycerols (fats), phosolipids, and steriods

Term
Fats are composed of a single _____ and three _______.
Definition
glycerol, fatty acids
Term

Fatty acids vary in ________ and in the _______ and ________ of double bonds.

Definition
length, number, location
Term

True or false:

 

Saturated fats contain double bonds.

 

 

Definition
False, saturated fats contain the maximum number are H atoms possible and therefore have no double bonds.
Term
Unsaturated fatty acids have _______ at their double bonds and are _______ at room temperature.
Definition
bends, liquid
Term
Phospholipids are composed of two ________ and a ________.
Definition
fatty acids, phosphate group
Term
Phosolipids form _______ in cells.
Definition
bilayer membranes
Term
Steriods structure and function:
Definition

Four fused rings with attched chemical groups

 

Function: component of cell membranes (chloesterol)

Signaling molecule (hormones)

Term
Polypeptides are polymers of ________ held together by ________ bonds.
Definition
amino acids, peptide
Term
A protein is composed of one or more ______ and has a specific shape or ________.
Definition
polypeptides, conformation
Term
Amino acids are acids possessing both _______ and ______ groups. They differ in properties due to ______, called R groups.
Definition

Carboyxl, Amino

 

Side chains

Term

A protein's specific confirmation (shape):

 

Determines -

 

Results from-

 

Is determined by-

Definition

- how it functions

 

-the folding of the polypeptide strand

 

-the sequence of amino acids

Term
Primary structure
Definition
The sequence of amino acids in a protein. Has direction with two distinct ends.
Term
Secondary structure
Definition
The folding or coiling of polypeptide regions resulting from Hydrogen bonds of the backbone only. Icludes the alpha helix and the beta pleated sheet. R groups are not involved.
Term
Tertiary structure
Definition
The overall three-dimensional shape of a polypeptide which results from interactions between amino acid side chains. Often contains regions of alpha helix and beta pleated structure.
Term
The four types of side chain interactions in tertiary structure:
Definition

1. Hydrogen bonds

2.Hydrophobic interactions and van der Waals interactions

3.Disulfide bridges

4.Ionic bonds

Term
Quaternary structure
Definition

Overall protein structure that results from the interaction and assembly of two or more polypeptide subunits.

 

Result from same interactions as in tertiary structure.

Term
mutation
Definition
A change in an amino acid in a protein.
Term

How do light microscopes work and what could you view with them?

 

Definition

They pass visble light (photons) through the specimenand magnify the image with optical lenses.

 

They can view most plant and animal cells, bateria, and some cell organelles.

Term
How do electron microscopes work and what can you view with this method?
Definition

They focus a beam of electron through a specimen or onto its surface.

 

You could view virus, lipids, ribosomes, and proteins

Term
How do scanning electron microscopes work and what are they useful for?
Definition

The electron beam scans the surface of the specimen, usually coated in a film of gold. The beam excites electrons on the surface, and these secondary electrons are dectected by a device which translates the pattern into an electronic image on a video screen. 

 

This method is useful for detailed study of the topography of a specimen.

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