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Applications of Molecular Genetics
positional cloning, molecular diagnosis
15
Biology
Undergraduate 2
02/07/2014

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Term
What is positional cloning?
Definition
cloning a gene based on its position on a chromosome
Term
What are the steps of positional cloning?
Definition
1. Genetic mapping
2. Physical mapping
3. Transcript mapping
4. Gene sequencing
5. Transformation of the mutant organism with the wild-type gene
Term
How might you check to see if a gene you cloned is being transcribed?
Definition
Could use Northern Blotting to see if an mRNA transcript can be detected
Term
Is Huntington's Disease an autosomal dominant or autosomal recessive disorder?
Definition
dominant
Term
What causes Huntington's Disease?
Definition
-expansion of a CAG repeat in the huntingtin gene
Term
How many copies of a CAG repeat is an HD patient likely to have?
Definition
42 to 100's
Term
True or False

The mutant huntingtin protein is cytotoxic
Definition
true
Term
Is HD a gain of function mutation, or loss of function?
Definition
gain of function
Term
How might you diagnose HD?
Definition
1. Amplify the CAG repeat using PCR
2. Use gel electrophoresis to determine how many repeats there are
3. Compare the 'mutant' to the results of a normal DNA sample
Term
True or False

Southern Blotting is required for molecular diagnosis of HD
Definition
false
Term
True or False

Cystic Fibrosis is a gain of function mutatin
Definition
False

loss of function
Term
Is cystic fibrosis autosomal recessive or autosomal dominant?
Definition
recessive
Term
What are some phenotypic observations that might indicate cystic fibrosis?
Definition
-salty sweat
-mucus accumulation in lungs/pancreas/liver
Term
What does the CF gene encode?
Definition
an ion channel protein
Term
How might you diagnose CF?
Definition
Southern Blotting using 2 allele-specific probes
-1 probe for the 'normal' allele
-1 probe for the mutant allele

See if the DNA of the person in question hybridizes to the normal or mutant allele, comparing to the results of a 'normal' individual.
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