Term
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Definition
*5-7 m long *digestive organs *accessory organs help digestion indirectly |
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Term
Digestive System Functions |
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Definition
INGESTION *food into mouth
SECRETION *release water, acid, buffers, enz, into lumen (need buffers to prevent breaking)
MIXING *churning food for mech break & chem food break w/ enz (digestion)
PROPULSION *push food through GI
DIGESTION *mech/chem break
ABSORPTION *passing digested products from GI tract into blood & lymph
DEFECATION eliminating feces |
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Term
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Definition
1) ORAL CAVITY & ESOPHAGUS 2) STOMACH 3) SM INT 4) LRG INT |
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Definition
SECRETION: saliva DIGESTION: carbohyd ABSORPTION:none MOTILITY: chew, swallow |
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Definition
SECRETION: parietal/chief cells; mucous, bicarb DIGESTION: some protein/fat ABSORPTION: lipid soluble (alcohol, aspirin) MOTILITY:peristaltic mix/ propulsion |
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Definition
SECRETION: enterocytes (secrete enz), goblet (secrete mucous), enx, bicarb, bile DIGESTION: polypep, carbo, fats, nuc acid ABSORPTION:AA, am pept; monosach, fat acid, cholesrol, N bases, H2O, ions, minerals, vits MOTILITY: mix, propulsion by segmentation; sime peristalsis |
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Term
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Definition
SECRETION: goblet cells DIGESTION: none (ecept bact) ABSORPTION:ions, minerals, vits, H2O (to solidify) MOTILITY: segmental mix, propulsion (mass) |
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Term
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Definition
CONSTIPATION LI absord too much H2O
COLIC horse dehydration, need more H2O |
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Term
Small Intestine Components |
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Definition
VILI *hair on sm int
MICROVILI *hair on hair
ENTEROENDOCRINE *secrete hormone secretin, cholecystokinin, GIP
PANETH CELLS *secrete lysozome, capable of phagocytosis
LYSOZOME *enz that kills bact
GOBLET CELL secrete mucous
ABSORPTIVE CELLS * absorbs nutrients |
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Term
Enteroendocrine Cell Components |
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Definition
S CELL *secrete secretin *stim secretion of pancreatic juice
CCK *secrete chloecystokinin(CCK) stim secretion of pancratic juice *cause bile eject gall bladder *inhibits gastric empty *induce statiety
K CELLS *secrete GIP, sim release of insuin from pancreatic B cell |
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Term
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Definition
*chyme stim S cell to prod secretin *secretin stim pancreas to secrete pancreatic bicarb into duod **panc juice neutralizes acid chyme *AA/ FA in chyme stim CCK cell to secrete CCK |
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Term
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Definition
*increases pancreatic enz secretion *causes bile release from gall *inhibits gastric empty |
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Term
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Definition
*sig by duod to manufacture bile (liver cells) **cant lose panc/liver b/c takes in too many nut *venous, nut rich blood -> liver through portal vessels BILE SALT- emulsify lrg lipid drops-> sm (micelles) BILE PIGMENT- mainly bilirubin (Hb of worn out RBC) *processes may absorbed nut |
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Term
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Definition
*blood is distributed to hepato through hepatic sinusoids *exract and process nut
1) combine simp carbo to form glyco 2) create lipid from gluc/ AA 3) distribute AA to blood 4)break excessive AA and worn out protein into gluc and triglyc
*after done, blood drains froom hepatic sinusoids -> central veins -> hepatic vein -> inferior vena cava |
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Term
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Definition
*stores ile from liver *CCK triggers bile release in duod of sm int through common bile duct |
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Term
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Definition
*secrete by pancreatic by acinar cells *clear, colorless (duod -> panc duct COMPOSITION Water Na Bicarb (neut stomach acid) Enz (panc amylase; trypsin, chymotrp, carboxypeptidase; panc lipase; ribonuclease, deoxyribonuclease) |
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Term
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Definition
*squishes around so enx can get to food *as sm int moves, pushes nut toward walls mucousa to abs *most carbo, lipid, protein digest *segmentation to mix chyme w/ digest enz *peristalsis propel chyme through *begin/ complete digestion of nuc acid *90% of nut/ water abs |
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Term
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Definition
*haustral churning, peristalsis, mass peristalsis to move contents toward exit *absorb water, ion, vits *any not absorbed forms feces *involved in defecation *3-10 hrs to pass chyme *NO ABS OF NUT (ONLY WATER + VITS PROD BY COLON) *ferment carbo release gas, flatus (H, CO2, CH4) |
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Definition
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Term
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Definition
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Term
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Definition
*ferment *break prot-> AA *bilirubin -> simp pig (stercobilin =brown poop) *prod ssentail vits B,K (abs in colon) |
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Term
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Definition
*chem substances in food that cells nedd for groeth, mainten, repair
CARBO, LIPID, PROTEIN, H2O, MINERAL, VITS |
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Term
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Definition
*subtances that the body cannot make on own in sufficeint quantities to meet needs *must come from diet *some AA, FA, vits, mins |
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Term
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Definition
*found in bones and teeth *bone structure *reg of enz func *maintenance of body fluis pH *osmosis (maintain osmolality) *gen of AP in nerves and muscles IMPORTANT MINS: Ca, P, K, S, Na, Cl, Mg |
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Term
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Definition
*org nut req in scant amounts to maintain normal growth and metab *can be coenz in chem rxn
FAT SOLUBLE (A, D, E, K) *absorbed from digest track, transported in chylomicrons *excess stored in body cells
WATER SOLUBLE (B, C) *dissolved in body fluids *excess excreted in urine
ANTIOXIDANT (C, E, B-ceratine) *inactive damaging free radicals of Ox |
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Term
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Definition
*helps synth things; all chem rxns in body(catalyze by enz/combos) |
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Term
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Definition
nonprotein compound for func of enz
E- CARRIER *nicoatinamide adenine dinucleotide (NAD+/NADH) *flavin adenine dinucleotide (FAD/FADH) |
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Term
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Definition
produces ATP and heat *make simp out of complex (leads to simp) |
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Term
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Definition
more complex *requries ATP |
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Term
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Definition
*(CH2O)n where n≥3 catabolized to monosach *fructose/ galactose -> glucose *if ATP need, gluc oxidized in glycolsyis *excess gluc stored as glyc in liver/ musc *glycogen full, liver converts excess gluc -> triglc to store in adipose *triglyc -> gluc when need |
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Term
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Definition
ingest protein and body protein broke into AA/ absorbed in sm Int |
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Term
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Definition
1) used to make new proteins 2) converted to gluc 3) CONVERT TO TRIGLYC 4) Convert to ketones 5) catabolized to gen ATP |
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Term
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Definition
*require E *help get to AcetylCoA |
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Term
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Definition
*AA uptaake stim by IGF and insulin *AA group removed through deamination -> NH3 *NH3 toxic so liver convert to urea (lost in urine) *remaining org component from catabolism used in cell resp (Krebs make ATP) |
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Term
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Definition
*sugars/ sach *most abundant MONO- basic carbo unit POLY- polymer of sevreal mono |
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Term
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Definition
*aldehyde/ ketone derrivatives of straight chain polyhydroeyl alcohol containing at least 3 C atoms *classified by chem nature & # C atoms
CARBONYL aldehyde/ ketone = alodse/ ketose |
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Term
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Definition
OH substituent on opposite side of sugar ring from CH2OH at the chiral center designating D/L *opposite sides |
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Term
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Definition
*OH substituent on the same side of sugar ring from CH2OH at the chiral center designating D/L *same side |
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Term
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Definition
*freely interconvert in aqueous soln *63.6% B *linear form minimally present |
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Term
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Definition
*bulkiest substituents could be equitorial/ axial *equitorial > axial (crowd) *B-D glucopyranose has all non H substituents in equitorial positions *B/c of ald & ketone groups- cyclic/ linear forms interconvert |
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Term
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Definition
*bond connecting anomermic C and alcohol ox *between anomeric and amine |
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Term
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Definition
*sach w/ anomeric C that have NOT formes glycosides that will reduce mild oxidizing reagents b/c free aldehyde group *once reduced: -ose -> -side |
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Term
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Definition
D *last OH on right
L *last OH on left |
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Term
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Definition
*AKA glycans *monosach units linked together by glycosidic bonds *can be breanched or linear b/c glycosidic linkages
HOMO- many units of one tpe monosach HETERO- many units of more than one type monosahc |
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Term
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Definition
*simplest polysach (60%B @ room T) *larger molecules hydrolysis prod *lactose (milk), sucrose (sugar) *in milk,interchange b/c T, pH, [] (affects crystalography, Solid state, solbility) |
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Term
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Definition
*lactase breaks lactose -> galac + gluc *galct polymerizes into gluc (fuel) *adults have less lactase so sugar in colon for bact fermentation to convert lactose (CO2, H2, org acid) = intolerance |
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Term
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Definition
*glucose + fructose *anomeric C both glycosidic bonded (non reducing) |
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Term
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Definition
*10615 kg synth annually (.5 C in atmosph) *15,000 gluc *parallel sheets w/ H bond/ vanderwall (cohesion, strength fibers) *B (1,4) D glucose units *lignin (intertwines,strength of polymer) *symbionts produce cellulase in anim *stacked chains (C2OH on C6 interact w/ OH on C3) |
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Term
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Definition
*makes green (500-3000) *interacts w/ cellulose polymer *make more stable |
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Term
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Definition
*Homopolymer: B (1-4) N acetytl- D glucosamine *cell walls fungi & algae, exoskelteon *very abundant *joint supplement b/c need glucosamine in joints w/ detachable residue |
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Term
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Definition
*mixture of glycans synth by plants *principal E reserve for plants *a-amylose & amylopectin *reducing sugars (reducing end) |
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Term
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Definition
*storage polysacharide of animals *in all cells (mainly in muscle/liver- cytoplasmic granules) *more branched than amylopectin (branch every 8-14) *series of a(1,4); branched at a(1,6) *degraded by glycogen phophorylase |
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Term
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Definition
*a (1,4) D glucose *linear polymer of glucose residues *a glycosidic bond diff from cellulose (can be helical) *eat starches (amylase breaks amylose -> maltose) |
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Term
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Definition
*O-a-D-glucopyranosyl (1,4)-a-D-glucopyranose *in germinating seeds b/c plants store sugar (sim to yolk) *can be caramelized into glucose |
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Term
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Definition
*a(1,4) glucose residues *branching @ a-(1,6), every 24-30 gluc *10^6 gluc residues per molecule |
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Term
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Definition
1)amylase breaks a(1,4) gluc link 2)a-glucosidases break both, one gluc link @ time 3) debranch enz hydorlyzes both a(1,6) and a(1,4) |
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Term
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Definition
GLYCOGEN PHOSPHORYLASE *degrades glycogen *cleaves a(1,4) gluc link on non red ends
GLYCOGEN DEBRANCHING ENZ *cleaves a(1,6) branches 1)transferase activity puts @ reducing end of glucose 2) glucosidase activity- moves only 1 @ time so move 3 over to take 1 off |
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Term
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Definition
*connective tissue around collagen in extracellular space/ gel matrix (tendon, skin, vess) *HA and others w/ mod Sulfate *unbranched polsac *uronic acid & hexosamine residues *high viscous + elastic (slimy, mucous0 |
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Term
Hyaluronate Hyaluronic Acid (HA) |
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Definition
*synovial fluid (joints, vitreous humor eye) *250-25000 B(1,4)between disaccharides *D glucuronic acid B(1,3) N acetyl-D-glucosamine *extended, rigid *repulsion of anionic groups bind cation/ lrg #s H2O (H2O accumulate around struct so in soln, inc vol) *low shear (mess) -> hyaluronate stiff, lines up (less resistance) *biological shock absorbers/ lubes (viscoelastic) b/c water bridge provide stability |
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Term
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Definition
*protein w/ carbohydrate contents *func as enz, recept, structural prot *polypeptide under genetic control (DNA-RNA-P) *crabohyd chains added enz-atically through covalent link *can have lots sugars or few |
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Term
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Definition
*protein + glycosaminoglycans *can be big *highly hydrated b/c (KS, CS w/ extended brushlike proteoglycan) *good at tensile stress and compression stress |
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Term
Proteoglycan: Bottle Brush Structure |
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Definition
BRISTLES *noncovalent to HA *Core protein, link protein, + GAGS
CORE PROTEIN *Bristle back *covalently. glycosidic attached bristles 1)N link oligosach- SM sugar protein attatch by amine 2) O link oligo- keratin sulfate, chondroitin sulfate (link GAGs to core protein) |
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Term
N-Link Oligosaccharide Polysaccharide ???? |
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Definition
*Asp, Asn, Ser, Thr *have protein w/ covalent link *take on multp combo of monosach together *have core w/ branches w/ diff func /combos |
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Term
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Definition
*all sugars attached to protein outside RBC **enz transfers sugars (blood type) *enz adds antigens to surf RBC O (type H) *universal donor, can only get O *looks good b/c everything matches A (type A) *receive A,O b/c WBC recognize on surf *no B
B (type B) *receive B, O *no A
AB *can receive A, B, AB, O (all) *prod both (universal recipient) |
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Term
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Definition
*plasma membs surround cell *intracell memb surround organeles *transport processes allow things through (ionic, polar hard to go through) |
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Term
Guidelines for Thermodynamic Transport |
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Definition
1) Free E change for moving a substance across memb depends on conc of each side. For ions, depends on memb potential -free E change allows out -> in ([] gradient)
2) For a substance that cannot diffuse easily, transport mediated by a protein. May also require free E input * |
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Term
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Definition
Free E of Solute ^GA = RTln([A]in/[A]out)
*can predict if molecule go in based on ^G *a difference in [] of subs on two sides generate chem pot diff |
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Term
Chemical Potential Difference |
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Definition
[A]out > [A]in *^GA < 0, ^G= - *spontaneous net flow of A in
[A]in > [A]out *^G > 0, ^G = + *net flow of A in not favored thermodynamically |
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Term
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Definition
*couple thermodynamically unfavored inward flow by coupling to exergonic rxn *sim to ATP hydrolysis *if not favorable to move against gradient, use to make favorable |
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Term
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Definition
*transmembrane movement of ions -> charge difference across a membrane *MEMB POT: ^ψ= ψ(in)-ψ(out) |
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Term
Electrochemical Potential |
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Definition
*^GA; up to -100mv = -0.1V = -0.1J/C *^GA= RTln([A]in/[A]out) + ZAF^ψ
*usully more - on inside (-100mv) |
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Term
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Definition
*charge difference across membrane PROCESS 1) K+ secrete out taking positive w/ (more in) 2)Na- leak in cell (more out) 3) Cause - in (K leave) 4)- charge across memb, - in
*allows transporters (need for Ca) to pull ions in w/ E |
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Term
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Definition
*non equilibrium distribution of ions on either side of memb
INTRACELLULAR Na: 12mM K: 140mM
EXTRACELLULAR Na: 150mM K: 4 mM |
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Term
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Definition
NONMEDIATED *no help; diffuses in direction eliminates []gradient at a rate proportional to magnitude *rate depends on solubility in nonpolar core *a substances driving force, chem pot gradient *EX: simple diffusion
MEDIATED *req action of specific carrier proteins/something *EX: passive mediated (facilitated), active |
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Term
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Definition
*move across membrane *[] based; high -> low *steroid, O2 easy |
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Term
Passive Mediated Transport (Facilitated Diffusion) |
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Definition
*molecule flows from high -> low *transport "door" *EX: ionophores, porins, ion channels, aquaporin, Gap junc, translocation molecules |
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Term
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Definition
*molecule low[] -> high [] *against [] gradient; pump uses ATP *ENDERGONIC: needs coupling *EX: PTYPE, ATYPE, ABC, NaK-ATPase, Ca ATPase |
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Term
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Definition
*org molecules (NOT PROTEIN) inc permeability of memb to ions *complexes must be soluble in nonpolar solvents *[] dependent *passively permit ion diffusion both direction (effect can equilibrate the [] of select ions) *TYPES: carrier & channel forming
EX: Coccidia- Eimeria *sporocytes invade chicken gut cells, form cyst -> diarrhea *ionophores treat (Na+ pumps Na out cocidia) *inc Na cause cell to inc H2O & parasite burst *phobic out, phillic in (pulls ion through) |
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Term
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Definition
1) bind select ions 2) diffuse through 3) release ion other side 4) return |
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Term
Channel-Forming Ionophores |
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Definition
*transmembrane channels through which selected ions can diffuse |
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Term
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Definition
*passive mediated *B-barrel struct, solutes selectively pass through channel *lrg passive channels *size fitting *EX: pores on out mitochondria (<5000D) |
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Term
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Definition
*passive mediated *ion specific; rapid passage of ions (Na K, Cl) *Movement essential for: 1) maintain osmot balance -need good amounts solute in cell 2) sig transduc *help set up by moving ions to start again 3)effecting changes in memb pot responsible for neurotransmission
*EX: K+, Gated channels |
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Term
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Definition
*allow K+ ions to passively diffuse from cyto -> extracellular *most permeable to K+ > Na *flow of K @10^8 ions/sec; quick *constitutively open (keep - memb pot) *out more nonpolar b/c in memb *4 subunits, e w/ 2 helices (thin to wide b/c only wants K) *selectively filter *rapid, highly selective *EX: KcsA |
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Term
Selectively filter of KcsA (K channel) |
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Definition
1)allows ions to pass 2)as enter thin, H2O set up around K+= rapid 3)@ filter, side chains of AA gets pushed out 1 @ time 4)even distribution b/c repulsion
*if Na goes in, smaller so bounces around and hard to get out |
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Term
Theories of rapid transit of KcsA |
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Definition
1) ease of movement b/c hydration shell K+ w/ 8 water 2) w/in filter, O from water and protein contribute to K selctivitey 3)repulsion of K+ ions |
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Term
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Definition
*allow to flow across gradients of memb *selectively open/closed (transiently to do task) *opening/ closing of channels in response to stimuli EX: mechanosensitive, ligand-gated, signal-gated, voltage-gated |
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Term
Mechanosensitive Ion Channels |
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Definition
*open in response to deformation in the lipid bilayer *touch, sound, ^Pomotic |
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Term
Ligand-Gated Ion Channels |
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Definition
*open in response to extracellular chem stimulus (neurotransmitter) *extracel stim cause to open |
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Term
Signal- Gated Ion Channels |
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Definition
*opens b/c of intracellularly binding Ca2+ ion/ some other signal molecule |
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Term
Voltage Gated Ion Channels |
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Definition
*open in response to a change in memb pot (nerve impulse) *EX: AP |
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Term
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Definition
the wave of transient change in memb pot
1) *resting state, slight - charge inside cell (cyto); polarized nerve (-70mV)
2) *stim of neuron causes Na open, Na in, inc in memb potential *reach gate/action threshold (induces neighbor Na channels open) *depolarization- all nearby Na gates open, Na rush in
3) *Na channels shut @ AP peak
4) *K+ gate open (b/c local memb depolar) *K ions in (repolar)
5) *repolarization over shoots so nerve can reset channels *hyperpolarization- 1) prevents the neuron from receiving another stimulus immediately after the first 2)raises the threshold for any new stimulus
6) *Na/K pump bring to rest pot *rest + refractory |
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Term
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Definition
*Na and K channels close before Na,K @ equilibrium *the next region cont depolarizing *Myelin- insulates to go faster
1: de ___ ____ 2: re de rest 3: rest re de |
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Term
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Definition
*A protein pore that conducts water through biological membranes *pore allows water through memb *span 1 memb *EX: AP1 |
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Term
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Definition
*a homotetrameric glycoprotein *6 transmembrane αhelices= hourglass;2 short helices w/in bilayer *narrow (2.8A= size Vander wall H2O) *size restriction
PORE: lined w/ phobic groups (lack of strong interact force water through) REGIONS: high conserved, Arg/His residues, backbone carbonyls lure other Hbond water molecules CENTER: conserved Asn, NH2 groups can Hbond w/ H2Oto reorient molecule so one leaves @time
*mostly phobic in so only 1 goes to 1 spot w/ His+Arg (lure pull H2O, +) *as H2O attracts it finds Arg to reorient and allow H2O out *no proton jump b/c too small |
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Term
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Definition
*join discrete regions of neighbor cells plasma memb *span 2 memb *sm molecules/ ions pass *single junc has 2 hexagonal rings connexins (connexons) *EX: translocation, GLUT1 |
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Term
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Definition
UNIPORT *movement of single molecule @ a time (GLUT1)
SYMPORT *simultaneously transport 2 different molecules in same direction *req both, same direction
ANTIPORT *simult transport 2 diff molecules in opposite direct *one in, one out |
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Term
Erythrocyte Glucose Transporter (GLUT1) |
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Definition
1) glucose binds to protein, special shape 2) transport, changing orientation 3) glucose dissociates 4)recovery, back to normal
*single molecule @ time |
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Term
P-Type ATPases (active transport) |
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Definition
*undergo phosphorylation as transport cations across memb (Na, K, Ca) *bring in + ions |
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Term
A-Type ATPases (active transport) |
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Definition
*transport anions across memb |
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Term
ABC Transporters (active transport) |
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Definition
*wide variety of substances (ions, sm metabolites, drug molecules) *ATP Binding Cassette |
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Term
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Definition
*use chem E from ATP *ATP used to move things in/out |
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Term
Secondary Active Transport |
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Definition
*uses electrochem potential |
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Term
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Definition
*transport ions in opposite direction *3 Na in, 2 K out <-> 3 Na out, 3 K in *phosphate from ATP covalently bound-> changes *most studied active transport (transmemb prot) *depends on phosphorylation of Asp *Two conformational states: E1, E2 *happens 1 direct b/c rxn coupling *highly dependent on everything *Mg+ used to stabilize phosphate - |
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Term
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Definition
E1: 1) enz interact w/ ATP 2) pick up 3 Na from ternary complex 3) w/ Mg, phosphyorlyate (make ADP) 4) high E conformational state (exer), so push to low E 5) transport Na out (ender)
E2 6)picks up 2K 7) hydrolysis of phosphate (exer) 8) moves into cell 9) opens spot for ATP bind (exer), get rid of K (ender) |
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Term
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Definition
*increases in cystolic [Ca] triggers cell responses (musc contract), neurootrasmit release, glyco break *cystolic [Ca]= 0.1uM, extracell [Ca]= 1500uM *active tranport maintains gradient *pumps out 2Ca, bring nin 2-3 H (w/ ATP hydrolysis) |
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Term
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Definition
*Na/K ATPases generate electrochem gradietn across memb *E can be harnessed for ender process
Na GLUC SYMPORT: in intestinal epithelia, take up gluc( 2Na in) *uphill gradient (more gluc in cell > lumen *gluc -> capillaries (passive mediated uniport)
Na/K ATPase: cause 3 Na leave *gradient maintained (more Na enter cell from symport) *2 K enter
*examples of 1*,2* active trans |
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Term
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Definition
*biological catalysts (diff from chem catalysts) *protein based so organic *classified by rxn type |
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Term
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Definition
1) HIGHER RXN RATE *enz rxn occur faster @10^6-10^12 greater uncatalyzed rxn
2) MILDER RXN COND *b/c body controlled env @ most 100C, neut pH, atm press *relative to some cond which chem rxn occur
3) GREATER RXN SPECIFICITY *have specific job, work w/ sp substrate/ product
4) CAPACITY FOR REGULATION *enz catalytic activity vary b/c [] of substances other than substrates |
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Term
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Definition
ACCEPTED NAME *enz commonly used name
SYSTEMATIC *more official *name of substrate + ase
ENZYME COMMISSION NAME (EC) |
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Term
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Definition
*substrates bind to enz w/ noncovalent (sim to Vander wall, Hbond, electrostaic, phobic) *geometric complementarity- shapes specialized for e other *electrotonic complementarity- charge, +/- *induced fit- conformational change (one, other, both) w/ subs bind |
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Term
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Definition
*enz =chiral (b/c AA) *need specific shape to bindn (inc level of detail) *bind w/ stereospecificity to one stereoisomer of substrate (asymmetric active site) * |
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Term
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Definition
*enz have degree of specificty (subs need to be right chirality, size, shape) *alcohol dehydrogenase catalyze oxidation of CH3CH2OH -> CH3CHO > CH3OH->H2CO > (CH3)2CHOOH -> (CH3)2CO *EX: chymotrypsin (can still digest even w/ little difference) |
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Term
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Definition
*reason anim need trace elements in diet
1)METAL IONS *some enz need help *Cu, Fe, Zn
2)COENZ *org molecules req for enz catalysis *bind to enz active site + particpate in catalysis but not considered subs of rxn
COSUBS *only trasnient associated w/ enz *bind + release, just there for rxn then leave
PROSTHETIC *organic/inorg w/ no AA *bound tight to protein *covalent permanent attach *contribute to enz process |
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