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26 Control of Gene Expression I
powerpoint lecture
22
Biology
Undergraduate 1
04/08/2011

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Term
Mutations
Definition
changes in the genetic material of a cell or virus
Term
Point mutations
Definition

chemical changes in just one base(nucleotide) pair of a gene

change of a single nucleotide in DNA can lead to the production of an abnormal protein

Term
What are the general categories of point mutations?
Definition

base-pair substitutions - replaces One nucleotide and its partner with another pair of nucleotides

 

 

base-pair insertions or deletions 

- additions or losses of nucleotide pairs in a gene

have disastrous effect on the resulting protein more often than substitutions do 

may alter the reading frame producing a frameshift mutation

Term
frameshift mutations
Definition
a genetic mutation that either inserts or deletes a series of nucleotides that is not divisible by three and thus disrupts gene expression by codons
Term
Silent mutations
Definition

have no effect on the amino acid produced by a codon because of redundancy in the genetic code

 

Most amino acids are encoded by several different codons. For example, if the third base in theTCT codon for serine is changed to any one of the other three bases, serine will still be encoded. Such mutations are said to be silent because they cause no change in their product and cannot be detected without sequencing the gene (or its mRNA).

Term
Missence mutations
Definition

still code for an amino acid, but not necessarily the right one...

 

With a missense mutation, the new nucleotide alters the codon so as to produce an altered amino acid in the protein product.

Term
Nosense mutations
Definition

change an amino acid codon into a stop codon, nearly always leading to a nonfunctional protein

 

 

With a nonsense mutation, the new nucleotide changes a codon that specified an amino acid to one of the STOP codons (TAA, TAG, or TGA). Therefore, translation of the messenger RNA transcribed from this mutant gene will stop prematurely. The earlier in the gene that this occurs, the more truncated the protein product and the more likely that it will be unable to function.

Term
Deletion mutations can cause various genetic disorders:
Definition

some cases of male infertility

 

2/3 of cases of Duchenne muscular dystrophy

Term
Cri du chat
Definition
occurs from deletion mutation, 1 in 50,000 births.... babies have distinctive cry, severe mental retardation and shortened life span
Term
Mutagens
Definition

physical or chemical agents that can cause mutations

 

(ionizing radiation, cigarette smoke UV light)

Term
 a cell can regulate the production of enzymes by
Definition

feedback inhibition - a form of metabolic control in which the end product of a chain of enzymatic reactions reduces the activity of an enzyme early in the pathway

 

gene regulation

Term
Operon
Definition

a cluster of functionally related genes under coordinated control by a single on-off switch

 

the switch is a segment of DNA called an operator (usually found within the promoter (nucleotide sequence in DNA to which RNA polymerase binds to begin transcription))

Term
What switches off the operon?
Definition

a protein repressor

which prevents gene transcription

binds to operator and blocks RNA polymerase

Term
a corepressor
Definition

molecule that cooperates with a repressor protein to switch an operon off. 

 

activates an inactive repressor

Term
Explain the relations between the trp operon on tryptophan
Definition

if tryptophan is present, it binds to the trp repressor protein turning the operon off. (repressor is only active in the presence of its corepressor tryptophan)

 

trp operon is turned off if tryptophan levels are high

Term
repressible operon vs. inducible operon
Definition

a repressible operon is usually on, a binding repressor shuts off the transcription

 

an inducible operon is one that is usually off, a molecule called an inducer inactivates the repressor and turns on transcription

Term
is the trp operon inducible or repressible
Definition
repressible
Term
Is the lac operon inducible or repressible 
Definition
inducible, it contains genes that code for enzymes used in the hydrolysis and metabolism of lactose
Term
Positive gene regulation
Definition

stimulatory protein

catabolite activator protein (CAP)

or an activator of transcription

Term
when glucose is scarce, what is activated?
Definition
CAP is activated by binding with cyclic AMP
Term
CAP attaches to the promoter of the lac operon, increasing the affinity of RNA polymerase.... thus....
Definition
accelerating transcription
Term
what type of pathways do inducible and repressible enzymes usually function in?
Definition

inducible --> catabolic pathways

 

repressible --> anabolic pathways

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